RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SNRPAP09012 282 aaKnown RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 CHN1P15882 459 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 ITGB6P18564 788 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 THOP1P52888 689 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 GYS2P54840 703 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 GNA12Q03113 381 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 MGAT5Q09328 741 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 SERINC3Q13530 473 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 SPARCL1Q14515 664 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CRYMQ14894 314 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 IRF4Q15306 451 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 UGP2Q16851 508 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 SKIDA1Q1XH10 827 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 ALG11Q2TAA5 492 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 KBTBD12Q3ZCT8 623 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 IGF2-ASQ6U949 168 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CAPN12Q6ZSI9 719 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 MICALCLQ6ZW33 695 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 USP53Q70EK8 1073 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 B4GALNT4Q76KP1 1039 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 RAB11FIP2Q7L804 512 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 NLRP9Q7RTR0 991 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 DCP2Q8IU60 420 aaKnown RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 HID1Q8IV36 788 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CTAGE3PQ8IX95 158 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 FBXO39Q8N4B4 442 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 ARL14Q8N4G2 192 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 PCDH20Q8N6Y1 951 aaKnown RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 TP53I13Q8NBR0 393 aaPredicted RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
VMP1-204ENST00000587259 ACMSDQ8TDX5 336 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 HMCESQ96FZ2 354 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CABS1Q96KC9 395 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 EXOC2Q96KP1 924 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CPNE1Q99829 537 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 TBL1YQ9BQ87 522 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CPEB1Q9BZB8 566 aaKnown RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 FAM107BQ9H098 131 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 MKS1Q9NXB0 559 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 MOCS1Q9NZB8 636 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 ZFATQ9P243 1243 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 SPASTQ9UBP0 616 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 SEPT3Q9UH03 358 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 TBK1Q9UHD2 729 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 IL17BQ9UHF5 180 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 TTLL3Q9Y4R7 772 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 OR1A2Q9Y585 309 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 HEMK1Q9Y5R4 338 aaPredicted RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 CSNK1G3Q9Y6M4 447 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 FAM169AQ9Y6X4 670 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 HEATR9A2RTY3 570 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 GMNCA6NCL1 334 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CAPN8A6NHC0 703 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 D6RAR5 112 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LMO7DNF2Z398 122 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 NDUFAB1O14561 156 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 TPP1O14773 563 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 KDELR3O43731 214 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 AP1G1O43747 822 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 BANF1O75531 89 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PIGNO95427 931 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 EPOP01588 193 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 MT-ND3P03897 115 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 HLA-DQB2P05538 268 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ITGA2BP08514 1039 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 TIMP2P16035 220 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 HLA-DPA1P20036 260 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 MGAT1P26572 445 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 GCAP28676 217 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CD68P34810 354 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 MAPK10P53779 464 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SESN2P58004 480 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 GUCY1A3Q02108 690 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PPARDQ03181 441 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SRSF1Q07955 248 aaKnown RBP eCLIP7.76□□□□□ -1.17
VMP1-204ENST00000587259 DMTNQ08495 405 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CCDC15Q0P6D6 951 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 CLCA4Q14CN2 919 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 DBN1Q16643 649 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 KCTD19Q17RG1 926 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 MYLK3Q32MK0 819 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ZNF805Q5CZA5 627 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PCID2Q5JVF3 399 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 HP1BP3Q5SSJ5 553 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 PDPK2PQ6A1A2 396 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ALG1LQ6GMV1 187 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ENPP7Q6UWV6 458 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 TTC7BQ86TV6 843 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 TMEM135Q86UB9 458 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LCA5Q86VQ0 697 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PTRH1Q86Y79 214 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 TRIM42Q8IWZ5 723 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LMNTD2Q8IXW0 634 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PPM1NQ8N819 430 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ANKS4BQ8N8V4 417 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PLA2G15Q8NCC3 412 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms