RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CLDN19Q8N6F1 224 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 SREK1Q8WXA9 508 aaKnown RBP10.05□□□□□ -0.8
APOC1-201ENST00000586638 KCNJ9Q92806 393 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 DTD2Q96FN9 168 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 COQ10AQ96MF6 247 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 TTC1Q99614 292 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 COPS8Q99627 209 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 RIOK2Q9BVS4 552 aaKnown RBP10.05□□□□□ -0.8
APOC1-201ENST00000586638 FAM83DQ9H4H8 585 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 RAD18Q9NS91 495 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 SEMA4GQ9NTN9 838 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 ABCF3Q9NUQ8 709 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 SMOXQ9NWM0 555 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 OXSMQ9NWU1 459 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
APOC1-201ENST00000586638 GPR179Q6PRD1 2367 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 BPTFQ12830 3046 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 AGAP14A8MT82 685 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TMEM114B3SHH9 223 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CHURC1-FNTBB4DL54 471 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 SUPT3HB4E1H0 165 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 F8W8V4 182 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 PSMD11O00231 422 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CDC7O00311 574 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 HGSO14964 777 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 SUPT3HO75486 399 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TRIM16O95361 564 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 KLF8O95600 359 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 HSPA4LO95757 839 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TSPAN12O95859 305 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CD9P21926 228 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 ATP5F1P24539 256 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 GRK2P25098 689 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 DRD3P35462 400 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 FNTBP49356 437 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 SATB1Q01826 763 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 IFT88Q13099 833 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CAMK2GQ13555 558 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 RCN2Q14257 317 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 GAS6Q14393 721 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TSNQ15631 228 aaKnown RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 CST6Q15828 149 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CSRP2Q16527 193 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TMEM52BQ4KMG9 183 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 KHDC1Q4VXA5 237 aaKnown RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 C2orf27AQ580R0 203 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TMEM196Q5HYL7 178 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 PIP5KL1Q5T9C9 394 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 ZNF776Q68DI1 518 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 MACC1Q6ZN28 852 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 RPS27LQ71UM5 84 aaKnown RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 PIWIL4Q7Z3Z4 852 aaKnown RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CRLF3Q8IUI8 442 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 PELI3Q8N2H9 469 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 SPEM1Q8N4L4 309 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 NKAPQ8N5F7 415 aaKnown RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CCNYL1Q8N7R7 359 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 OR6Y1Q8NGX8 325 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 CXorf40AQ8TE69 158 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 AP2M1Q96CW1 435 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 NUS1Q96E22 293 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 ATOH8Q96SQ7 321 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TMEM120AQ9BXJ8 343 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 TRIM55Q9BYV6 548 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 DERL2Q9GZP9 239 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 RSPH9Q9H1X1 276 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 C8orf33Q9H7E9 229 aaPredicted RBP10.04□□□□□ -0.8
APOC1-201ENST00000586638 SYTL2Q9HCH5 934 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 NCKIPSDQ9NZQ3 722 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 SERGEFQ9UGK8 458 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 FANCMQ8IYD8 2048 aa10.04□□□□□ -0.8
APOC1-201ENST00000586638 DOCK9Q9BZ29 2069 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 IGLV3-16A0A075B6K0 115 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 A0A0G2JND7 137 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 A0A1W2PP55 124 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 BTN3A1O00481 513 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 NEMP1O14524 444 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 WNT9AO14904 365 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 INPP4BO15327 924 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 LZTS3O60299 673 aaPredicted RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 SYNCRIPO60506 623 aaKnown RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 FOXD2O60548 495 aaPredicted RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 MMP20O60882 483 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 KERAO60938 352 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 SMIM24O75264 130 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 SLC25A14O95258 325 aaPredicted RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 CHRNGP07510 517 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 HOXB2P14652 356 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 NSG1P42857 185 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 KCNC1P48547 511 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 COPAP53621 1224 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 PRKAA2P54646 552 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms