RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ATAT1Q5SQI0 421 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 LIPIQ6XZB0 460 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 RAVER1Q8IY67 606 aaKnown RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 PDPRQ8NCN5 879 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 OR56A4Q8NGH8 313 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 TIFAQ96CG3 184 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 C19orf60Q96EN9 201 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 DCUN1D1Q96GG9 259 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 LENG8Q96PV6 779 aaPredicted RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 MYADMQ96S97 322 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 ABCG8Q9H221 673 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 SEMA4BQ9NPR2 832 aaPredicted RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 TSR3Q9UJK0 312 aaKnown RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 SARDHQ9UL12 918 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 PPM1HQ9ULR3 514 aa21.95■■□□□ 1.1
CIRBP-208ENST00000586548 TNPO3Q9Y5L0 923 aaKnown RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 COPG1Q9Y678 874 aaKnown RBP21.95■■□□□ 1.1
CIRBP-208ENST00000586548 CFAP99D6REC4 459 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 THRAP10827 490 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ENO3P13929 434 aaPredicted RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ATP1B2P14415 290 aaPredicted RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 AKT1P31749 480 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 GJA4P35212 333 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ZNF284Q2VY69 593 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 CYHR1Q6ZMK1 362 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 NRSN1Q8IZ57 195 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 PIP4K2CQ8TBX8 421 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 RTKNQ9BST9 563 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 PLA2G2FQ9BZM2 168 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ZBTB26Q9HCK0 441 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 UTP6Q9NYH9 597 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 G3BP2Q9UN86 482 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 DNAJC15Q9Y5T4 150 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 TBC1D3BA6NDS4 549 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 MEI4A8MW99 385 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 FFAR2O15552 330 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 AP2A2O94973 939 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 PSMC3P17980 439 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 EIF2DP41214 584 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 RAP1GDS1P52306 607 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 GRM2Q14416 872 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 FBXO48Q5FWF7 155 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 SERPINA13PQ6UXR4 307 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 DDHD1Q8NEL9 900 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 RP9Q8TA86 221 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 TWIST2Q8WVJ9 160 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ELSPBP1Q96BH3 223 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 HGH1Q9BTY7 390 aa21.94■■□□□ 1.1
CIRBP-208ENST00000586548 RIOK2Q9BVS4 552 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 NUSAP1Q9BXS6 441 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 EIF2B4Q9UI10 523 aaKnown RBP21.94■■□□□ 1.1
CIRBP-208ENST00000586548 ANKRD12Q6UB98 2062 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 H0Y858 1186 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 E2F3O00716 465 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 TM7SF2O76062 418 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 ESRRBO95718 433 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 AOAHP28039 575 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 CDC16Q13042 620 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 ADAM15Q13444 863 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 GBX1Q14549 363 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 CES5AQ6NT32 575 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 LARP4Q71RC2 724 aaKnown RBP eCLIP21.93■■□□□ 1.1
CIRBP-208ENST00000586548 EFL1Q7Z2Z2 1120 aaKnown RBP21.93■■□□□ 1.1
CIRBP-208ENST00000586548 SFTPA1Q8IWL2 248 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 ARRDC3Q96B67 414 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 PPP1R16AQ96I34 528 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 VPS35Q96QK1 796 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 RDH14Q9HBH5 336 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 ADAMTS6Q9UKP5 1117 aa21.93■■□□□ 1.1
CIRBP-208ENST00000586548 CEP290O15078 2479 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 LOC100653049A0A140TA62 436 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 UBDO15205 165 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 KRT34O76011 436 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 CCR7P32248 378 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 FOXA1P55317 472 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 ELP6Q0PNE2 266 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 GRIN2CQ14957 1233 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 ACOX1Q15067 660 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 RBBP7Q16576 425 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 PREPLQ4J6C6 727 aaPredicted RBP21.92■■□□□ 1.1
CIRBP-208ENST00000586548 NAIF1Q69YI7 327 aaPredicted RBP21.92■■□□□ 1.1
CIRBP-208ENST00000586548 MARK4Q96L34 752 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 ZNF382Q96SR6 550 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 FAM129BQ96TA1 746 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 KXD1Q9BQD3 176 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 DENND2DQ9H6A0 471 aaPredicted RBP21.92■■□□□ 1.1
CIRBP-208ENST00000586548 THAP10Q9P2Z0 257 aaPredicted RBP21.92■■□□□ 1.1
CIRBP-208ENST00000586548 PTBP2Q9UKA9 531 aaKnown RBP21.92■■□□□ 1.1
CIRBP-208ENST00000586548 FADS2P1A8MWK0 482 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 GIPC1O14908 333 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 KPNA5O15131 536 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 SPINT1O43278 529 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 VCLP18206 1134 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 MSH3P20585 1137 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 PKNOX1P55347 436 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 CUL3Q13618 768 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 SQLEQ14534 574 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 LDLRAP1Q5SW96 308 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 SYVN1Q86TM6 617 aa21.92■■□□□ 1.1
CIRBP-208ENST00000586548 SNX32Q86XE0 403 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms