RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 NDE1Q9NXR1 346 aa29.39■■■□□ 2.3
H3F3B-203ENST00000586518 SUN2Q9UH99 717 aa29.39■■■□□ 2.3
H3F3B-203ENST00000586518 FFAR2O15552 330 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 ITGB7P26010 798 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 MMP12P39900 470 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 HK3P52790 923 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 PKNOX1P55347 436 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 IRX1P78414 480 aaPredicted RBP29.38■■■□□ 2.29
H3F3B-203ENST00000586518 CUL3Q13618 768 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 E2F5Q15329 346 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 SBSNQ6UWP8 590 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 CHSY3Q70JA7 882 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 SUSD6Q92537 303 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 CCDC97Q96F63 343 aaPredicted RBP29.38■■■□□ 2.29
H3F3B-203ENST00000586518 NSUN5Q96P11 429 aaKnown RBP29.38■■■□□ 2.29
H3F3B-203ENST00000586518 THTPAQ9BU02 230 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 ZBTB26Q9HCK0 441 aa29.38■■■□□ 2.29
H3F3B-203ENST00000586518 UTP6Q9NYH9 597 aaKnown RBP29.38■■■□□ 2.29
H3F3B-203ENST00000586518 ESRRBO95718 433 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 VCLP18206 1134 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 EIF2DP41214 584 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 HYAL1Q12794 435 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 LDLRAP1Q5SW96 308 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 FBXL19Q6PCT2 694 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 SYCE2Q6PIF2 218 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 SERPINA13PQ6UXR4 307 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 Q6ZVL8 140 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 PELI3Q8N2H9 469 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 PDPRQ8NCN5 879 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 TWIST2Q8WVJ9 160 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 FAM161BQ96MY7 647 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 CCT7Q99832 543 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 RDH14Q9HBH5 336 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 COPG1Q9Y678 874 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 PABPN1LA6NDY0 278 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 H0Y858 1186 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 CHUKO15111 745 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 UROSP10746 265 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 ETV3P41162 512 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 RALGDSQ12967 914 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 ZNF234Q14588 700 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 ACOX1Q15067 660 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 UGT3A2Q3SY77 523 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 SULT1C3Q6IMI6 304 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 METTL2BQ6P1Q9 378 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 PARS2Q7L3T8 475 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 PIP4K2CQ8TBX8 421 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 EGFL8Q99944 293 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 TRIM54Q9BYV2 358 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 TSR3Q9UJK0 312 aaKnown RBP29.37■■■□□ 2.29
H3F3B-203ENST00000586518 DNAJC15Q9Y5T4 150 aa29.37■■■□□ 2.29
H3F3B-203ENST00000586518 OTOL1A6NHN0 477 aaPredicted RBP29.36■■■□□ 2.29
H3F3B-203ENST00000586518 PSMC3P17980 439 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 CPOXP36551 454 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 AGTR2P50052 363 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 STX1BP61266 288 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 B4GALNT1Q00973 533 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 C9orf64Q5T6V5 341 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 TMEM198Q66K66 360 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 C16orf89Q6UX73 402 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 LIPIQ6XZB0 460 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 GPRIN3Q6ZVF9 776 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 DDIASQ8IXT1 998 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 CHCHD4Q8N4Q1 142 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 RIOK2Q9BVS4 552 aaKnown RBP29.36■■■□□ 2.29
H3F3B-203ENST00000586518 PPM1HQ9ULR3 514 aa29.36■■■□□ 2.29
H3F3B-203ENST00000586518 RFXAPO00287 272 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 WNT9AO14904 365 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 FTH1P02794 183 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 ATP4BP51164 291 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 POM121L1PQ3SYA9 428 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 CDKL4Q5MAI5 379 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 PLEKHS1Q5SXH7 462 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 HENMT1Q5T8I9 393 aaKnown RBP29.35■■■□□ 2.29
H3F3B-203ENST00000586518 TECPR1Q7Z6L1 1165 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 SNX32Q86XE0 403 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 ELSPBP1Q96BH3 223 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 VPS35Q96QK1 796 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 ZNF382Q96SR6 550 aa29.35■■■□□ 2.29
H3F3B-203ENST00000586518 DENND2DQ9H6A0 471 aaPredicted RBP29.35■■■□□ 2.29
H3F3B-203ENST00000586518 EIF2B4Q9UI10 523 aaKnown RBP29.35■■■□□ 2.29
H3F3B-203ENST00000586518 MEI4A8MW99 385 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 C1QTNF3-AMACRE9PGA6 284 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 PPP1R3AQ16821 1122 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 LARP4Q71RC2 724 aaKnown RBP eCLIP29.34■■■□□ 2.293e-9■■□□□ 12.5
H3F3B-203ENST00000586518 NET1Q7Z628 596 aaPredicted RBP29.34■■■□□ 2.29
H3F3B-203ENST00000586518 DDHD1Q8NEL9 900 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 FBXO27Q8NI29 283 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 SCAMP4Q969E2 229 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 RIPOR3Q96MK2 946 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 E2F3O00716 465 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 ENO2P09104 434 aaPredicted RBP29.34■■■□□ 2.29
H3F3B-203ENST00000586518 MPC1LP0DKB6 136 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 HLA-EP13747 358 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 AOAHP28039 575 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 GJA4P35212 333 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 SLC25A3Q00325 362 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 TTC23LQ6PF05 361 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 CYHR1Q6ZMK1 362 aa29.34■■■□□ 2.29
H3F3B-203ENST00000586518 ULK2Q8IYT8 1036 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms