RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 UBALD2Q8IYN6 164 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 CENPLQ8N0S6 344 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 TCAIMQ8N3R3 496 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 FBXO39Q8N4B4 442 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 RAB42Q8N4Z0 105 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CCNYL1Q8N7R7 359 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 GBP7Q8N8V2 638 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 TSTD1Q8NFU3 115 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CD200R1Q8TD46 325 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 BTN2A2Q8WVV5 523 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 HMGB4Q8WW32 186 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 FAM136AQ96C01 138 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ERLEC1Q96DZ1 483 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 HIC2Q96JB3 615 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UBXN10Q96LJ8 280 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 COQ10AQ96MF6 247 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 GUCD1Q96NT3 240 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ELAC2Q9BQ52 826 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 TRMOQ9BU70 441 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 MECRQ9BV79 373 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 WWP1Q9H0M0 922 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ABCG8Q9H221 673 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 STN1Q9H668 368 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 WDR26Q9H7D7 661 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SGK2Q9HBY8 427 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 NPHS2Q9NP85 383 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 MRGBPQ9NV56 204 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 NUDT4Q9NZJ9 180 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SIRPGQ9P1W8 387 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ARL2BPQ9Y2Y0 163 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 COQ6Q9Y2Z9 468 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 DHRS7Q9Y394 339 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ANGPTL3Q9Y5C1 460 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TNPO3Q9Y5L0 923 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 USH1CQ9Y6N9 552 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PCM1Q15154 2024 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TNRC18O15417 2968 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 A0A0G2JND7 137 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 GOLGA8QA0A0J9YX86 632 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 A0A0U1RQS6 177 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 GOLGA8OA6NCC3 632 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NPEPPSL1A6NEC2 478 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 OR2AG2A6NM03 316 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 TRPC5OSA6NMA1 111 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 LOC730098B7Z3J9 87 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 GOLGA8NF8WBI6 632 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CACNB4O00305 520 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 GAPDHSO14556 408 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 FPGTO14772 594 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 LIN7AO14910 233 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 GPR39O43194 453 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NARSO43776 548 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZBTB14O43829 449 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NPHS1O60500 1241 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 RNGTTO60942 597 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZNF217O75362 1048 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 SUPT7LO94864 414 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CDK14O94921 469 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 TGDSO95455 350 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 TOP3BO95985 862 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 CATP04040 527 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 ANXA5P08758 320 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 MPC1LP0DKB6 136 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ITGB6P18564 788 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 DRD4P21917 467 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 HTR1BP28222 390 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PBLDP30039 288 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 OXTRP30559 389 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NUDT1P36639 197 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PIK3CGP48736 1102 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PRLHRP49683 370 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ARFIP2P53365 341 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 COPAP53621 1224 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ADPRHP54922 357 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ABCE1P61221 599 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 NFKB2Q00653 900 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 HSPA14Q0VDF9 509 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 BST1Q10588 318 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PRKAA1Q13131 559 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 MPP2Q14168 576 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PTPRRQ15256 657 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZRSR2Q15696 482 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 MAP7D1Q3KQU3 841 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZNF549Q6P9A3 640 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PAQR3Q6TCH7 311 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZCCHC23Q6ZST2 131 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CCDC121Q6ZUS5 278 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NEK10Q6ZWH5 1172 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ACAD11Q709F0 780 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 EFL1Q7Z2Z2 1120 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 FAM124AQ86V42 546 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 LRRTM4Q86VH4 590 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 NLRP8Q86W28 1048 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 HORMAD1Q86X24 394 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms