RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ARF5P84085 180 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 CHRNB3Q05901 458 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 CACNG1Q06432 222 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 LRRC66Q68CR7 880 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 LHX8Q68G74 356 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 TMEM25Q86YD3 366 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 C12orf76Q8N812 135 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 FAM120BQ96EK7 910 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 VCX3AQ9NNX9 186 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 GNPTGQ9UJJ9 305 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 MRPS23Q9Y3D9 190 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 KERAO60938 352 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 FGF18O76093 207 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 GLUD1P00367 558 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ANXA5P08758 320 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 IDO1P14902 403 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 RING1Q06587 406 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 LMAN2Q12907 356 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ZFP1Q6P2D0 407 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 Q6ZVL8 140 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 CHST15Q7LFX5 561 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 TMEM159Q96B96 161 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 KIAA1522Q9P206 1035 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 INVSQ9Y283 1065 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 PRKAB1Q9Y478 270 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 TLL1O43897 1013 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ALBP02768 609 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 SOD2P04179 222 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 LINGO3P0C6S8 592 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 OGNP20774 298 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 CAPN3P20807 821 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 TMED1Q13445 227 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ARHGAP15Q53QZ3 475 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 STK40Q8N2I9 435 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ITFG1Q8TB96 612 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 KIAA1191Q96A73 305 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 FUBP1Q96AE4 644 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 PLD4Q96BZ4 506 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 NLE1Q9NVX2 485 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 MTRRQ9UBK8 725 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 RNF11Q9Y3C5 154 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 ARIH1Q9Y4X5 557 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 TBC1D4O60343 1298 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 GBAP04062 536 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ADH1AP07327 375 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 OR56A5P0C7T3 313 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 HSPA1AP0DMV8 641 aaKnown RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 HSPA1BP0DMV9 641 aaKnown RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 HLA-EP13747 358 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 NR4A1P22736 598 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 PTGER3P43115 390 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LAPTM5Q13571 262 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ADGRE1Q14246 886 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LAPTM4AQ15012 233 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 AAK1Q2M2I8 961 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 SPESP1Q6UW49 350 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 OR52E6Q96RD3 313 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TFB2MQ9H5Q4 396 aaKnown RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ASB1Q9Y576 335 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LOC285095A0A1B0GVY8 99 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LOC730098B7Z3J9 87 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 SAP18O00422 153 aaKnown RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LDLRP01130 860 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 KRT6AP02538 564 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 KRT6BP04259 564 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ALDOCP09972 364 aaKnown RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 SOAT1P35610 550 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 KRT6CP48668 564 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 IRX1P78414 480 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 SMARCB1Q12824 385 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LY6G5CQ5SRR4 150 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ZBTB2Q8N680 514 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 KLHL23Q8NBE8 558 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TPD52L3Q96J77 140 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 MPP4Q96JB8 637 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 MGAMO43451 1857 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LCHNA4D1U4 455 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 STK16O75716 305 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 OTCP00480 354 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 ESR1P03372 595 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 FDXRP22570 491 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 HOXC8P31273 242 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TLR1Q15399 786 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TEAD2Q15562 447 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 PHKG1Q16816 387 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TCTN1Q2MV58 587 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 AP1ARQ63HQ0 302 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 GLYATQ6IB77 296 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms