RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 FAM71DQ8N9W8 422 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 ISG20Q96AZ6 181 aaKnown RBP11.34□□□□□ -0.59
NUP85-224ENST00000583948 SNF8Q96H20 258 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 NSMCE3Q96MG7 304 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 C5orf34Q96MH7 638 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 ULBP3Q9BZM4 244 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 DTLQ9NZJ0 730 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 SLC5A6Q9Y289 635 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 PCYT1BQ9Y5K3 369 aaPredicted RBP11.34□□□□□ -0.59
NUP85-224ENST00000583948 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
NUP85-224ENST00000583948 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 A6NL46 340 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 KCNN4O15554 427 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 KIAA0754O94854 1291 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 TIAF1O95411 115 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 SERPINB6P35237 376 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 MMP12P39900 470 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 RGRP47804 291 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 PGDP52209 483 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 PLTPP55058 493 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 GDF10P55107 478 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 RAB15P59190 212 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 SLC10A2Q12908 348 aaPredicted RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 GPS1Q13098 491 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 NFATC2Q13469 925 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 PAFAH1B3Q15102 231 aaKnown RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 UGP2Q16851 508 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 CEACAM20Q6UY09 585 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 ZNF517Q6ZMY9 492 aaPredicted RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 BZW1Q7L1Q6 419 aaKnown RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 CAMK1DQ8IU85 385 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 RBMXL3Q8N7X1 1067 aaKnown RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 AENQ8WTP8 325 aaKnown RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 CT55Q8WUE5 264 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 SEC14L1Q92503 715 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 SNRNP40Q96DI7 357 aaKnown RBP11.33□□□□□ -0.6
NUP85-224ENST00000583948 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 QKIQ96PU8 341 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP85-224ENST00000583948 SLC25A23Q9BV35 468 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 ZYG11BQ9C0D3 744 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 LHX3Q9UBR4 397 aa11.33□□□□□ -0.6
NUP85-224ENST00000583948 SVILO95425 2214 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 F5H423 210 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 PPP1R12AO14974 1030 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 POLR1CO15160 346 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 CREG1O75629 220 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 RBL1P28749 1068 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 HTR7P34969 479 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 SEPHS1P49903 392 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 GFERP55789 205 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 RHOAP61586 193 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 AP1B1Q10567 949 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 XRCC4Q13426 336 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 IL10RAQ13651 578 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 PDK1Q15118 436 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 CYTH1Q15438 398 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 P3H1Q32P28 736 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 IZUMO3Q5VZ72 239 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 DENND2CQ68D51 928 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 SLC6A19Q695T7 634 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 MARK2Q7KZI7 788 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 TRIM74Q86UV6 250 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 ZNF354CQ86Y25 554 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 TAB3Q8N5C8 712 aaPredicted RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 LRRC45Q96CN5 670 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 AHCYL2Q96HN2 611 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 CELF6Q96J87 481 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 EFHD1Q9BUP0 239 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 TBC1D10AQ9BXI6 508 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 SLAMF7Q9NQ25 335 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 FBXO8Q9NRD0 319 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 WHRNQ9P202 907 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 PDP2Q9P2J9 529 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
NUP85-224ENST00000583948 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
NUP85-224ENST00000583948 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms