RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 DRG1Q9Y295 367 aaKnown RBP20.2■□□□□ 0.82
SRSF1-206ENST00000583741 MAN2B2Q9Y2E5 1009 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 TTI1O43156 1089 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 CTIFO43310 598 aaKnown RBP20.19■□□□□ 0.82
SRSF1-206ENST00000583741 CLDN7O95471 211 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 GAS8O95995 478 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 ACP5P13686 325 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 F8A1P23610 371 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 MRPS25P82663 173 aaKnown RBP20.19■□□□□ 0.82
SRSF1-206ENST00000583741 DSC2Q02487 901 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 ITKQ08881 620 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 LACTB2Q53H82 288 aaPredicted RBP20.19■□□□□ 0.82
SRSF1-206ENST00000583741 C16orf46Q6P387 395 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 NDUFAF2Q8N183 169 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 SLCO2A1Q92959 643 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 TBC1D10AQ9BXI6 508 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 TDRD1Q9BXT4 1180 aaKnown RBP20.19■□□□□ 0.82
SRSF1-206ENST00000583741 POLR1EQ9GZS1 481 aaKnown RBP20.19■□□□□ 0.82
SRSF1-206ENST00000583741 CHKBQ9Y259 395 aa20.19■□□□□ 0.82
SRSF1-206ENST00000583741 PRR19A6NJB7 356 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 FADS2P1A8MWK0 482 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 K7EM74 188 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 POLR1CO15160 346 aaPredicted RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 SNX2O60749 519 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 PRLP01236 227 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 NTRK1P04629 796 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 TCN2P20062 427 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 NR1D1P20393 614 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 EPHB1P54762 984 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 EPHA4P54764 986 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 PDK1Q15118 436 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 DARS2Q6PI48 645 aaKnown RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 GSTA5Q7RTV2 222 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 CDKL3Q8IVW4 592 aaPredicted RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 TMEM121Q9BTD3 319 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 TRIT1Q9H3H1 467 aaKnown RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 STN1Q9H668 368 aaKnown RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 TP53TG5Q9Y2B4 290 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 MN1Q10571 1320 aaPredicted RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 UNC79Q9P2D8 2635 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 NOTCH2Q04721 2471 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 HACD1B0YJ81 288 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 PPP1R12AO14974 1030 aaPredicted RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 F3P13726 295 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 ZNF28P17035 718 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 MX2P20592 715 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 PTGIRP43119 386 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 GFERP55789 205 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 SLC7A5Q01650 507 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 MC1RQ01726 317 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 PPP1R7Q15435 360 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 CRTC2Q53ET0 693 aaPredicted RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 ALG1LQ6GMV1 187 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 SLC9B2Q86UD5 537 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 TFB1MQ8WVM0 346 aaKnown RBP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 SH3KBP1Q96B97 665 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 QKIQ96PU8 341 aaKnown RBP eCLIP20.18■□□□□ 0.82
SRSF1-206ENST00000583741 CPNE7Q9UBL6 633 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 KCNMB2Q9Y691 235 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 RPS6KL1Q9Y6S9 549 aa20.18■□□□□ 0.82
SRSF1-206ENST00000583741 RP1L1Q8IWN7 2480 aaPredicted RBP20.17■□□□□ 0.82
SRSF1-206ENST00000583741 FAM187AA6NFU0 413 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 GALNT2Q10471 571 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 NAA30Q147X3 362 aaPredicted RBP20.17■□□□□ 0.82
SRSF1-206ENST00000583741 HENMT1Q5T8I9 393 aaKnown RBP20.17■□□□□ 0.82
SRSF1-206ENST00000583741 LYSMD3Q7Z3D4 306 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 FAM26EQ8N5C1 309 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 ESX1Q8N693 406 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 MIB2Q96AX9 1013 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 TRIM51Q9BSJ1 452 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 C10orf88Q9H8K7 445 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 PRDM8Q9NQV8 689 aa20.17■□□□□ 0.82
SRSF1-206ENST00000583741 DMGDHQ9UI17 866 aaKnown RBP20.17■□□□□ 0.82
SRSF1-206ENST00000583741 ICE1Q9Y2F5 2266 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 PRRC2CQ9Y520 2896 aaKnown RBP20.16■□□□□ 0.82
SRSF1-206ENST00000583741 UQCRHLA0A096LP55 91 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 MTSS1O43312 755 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 UQCRHP07919 91 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 ANKRD34CP0C6C1 535 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 GARSP41250 739 aaKnown RBP20.16■□□□□ 0.82
SRSF1-206ENST00000583741 TERF1P54274 439 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 KLRB1Q12918 225 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 SEPT6Q14141 434 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 MAP7Q14244 749 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 SYDE1Q6ZW31 735 aaPredicted RBP20.16■□□□□ 0.82
SRSF1-206ENST00000583741 B4GALNT4Q76KP1 1039 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 CCNYQ8ND76 341 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 LPCAT1Q8NF37 534 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 ARRDC2Q8TBH0 407 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 MAML1Q92585 1016 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 HDAC11Q96DB2 347 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 PSMG3-AS1Q96PY0 264 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 ULBP3Q9BZM4 244 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 BRD8Q9H0E9 1235 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 RAB17Q9H0T7 212 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 ANKZF1Q9H8Y5 726 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 OGFRQ9NZT2 677 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 TTLL3Q9Y4R7 772 aa20.16■□□□□ 0.82
SRSF1-206ENST00000583741 KIR2DS5A0A0G2JLQ3 304 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 A0A0G2JNG1 304 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms