RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ZDHHC20Q5W0Z9 365 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 TTC27Q6P3X3 843 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 VASH2Q86V25 355 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 AMZ2Q86W34 360 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 CLDN19Q8N6F1 224 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 OR10G6Q8NH81 332 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 AHCYL2Q96HN2 611 aaKnown RBP12.34□□□□□ -0.43
CBX1-206ENST00000581003 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 CTRCQ99895 268 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 WWP1Q9H0M0 922 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
CBX1-206ENST00000581003 ACACAQ13085 2346 aa12.34□□□□□ -0.43
CBX1-206ENST00000581003 CCDC162PA2VCL2 907 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 MROH6A6NGR9 719 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 LILRA5A6NI73 299 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 EFSO43281 561 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 VIPP01282 170 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 XRCC1P18887 633 aaPredicted RBP12.33□□□□□ -0.44
CBX1-206ENST00000581003 WT1P19544 449 aaPredicted RBP12.33□□□□□ -0.44
CBX1-206ENST00000581003 IDSP22304 550 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 CRADDP78560 199 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 GPLD1P80108 840 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 EIF3IQ13347 325 aaKnown RBP12.33□□□□□ -0.44
CBX1-206ENST00000581003 SQSTM1Q13501 440 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 SEMA5AQ13591 1074 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 RPE65Q16518 533 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 DBN1Q16643 649 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 ARHGAP40Q5TG30 622 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 AGAP9Q5VTM2 703 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 TMEM71Q6P5X7 295 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 NAPRTQ6XQN6 538 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 FAM129CQ86XR2 697 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 TRIM48Q8IWZ4 208 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 BMPERQ8N8U9 685 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 OR13J1Q8NGT2 312 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 ART4Q93070 314 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 TGM7Q96PF1 710 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 ZCCHC2Q9C0B9 1178 aaKnown RBP12.33□□□□□ -0.44
CBX1-206ENST00000581003 APMAPQ9HDC9 416 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 SLC40A1Q9NP59 571 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 IMP3Q9NV31 184 aaKnown RBP12.33□□□□□ -0.44
CBX1-206ENST00000581003 PCDHGA7Q9Y5G6 932 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 PRSS21Q9Y6M0 314 aa12.33□□□□□ -0.44
CBX1-206ENST00000581003 URB1O60287 2271 aaKnown RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 IGLV3-16A0A075B6K0 115 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 UBXN7O94888 489 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 SUN1O94901 812 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 POLBP06746 335 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 APRTP07741 180 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 SLC2A4P14672 509 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 ITGALP20701 1170 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 DMPKQ09013 629 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 SEMA3AQ14563 771 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 CCNG2Q16589 344 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 ZNF658BQ4V348 819 aaPredicted RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 BCL7AQ4VC05 210 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 ANKS6Q68DC2 871 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 PCSK4Q6UW60 755 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 PPP1R21Q6ZMI0 780 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 TAS2R42Q7RTR8 314 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 CCDC89Q8N998 374 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 DNAAF3Q8N9W5 541 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 CXorf40BQ96DE9 158 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 PPP1R2P1Q96PQ5 205 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 COPS8Q99627 209 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 AP1M1Q9BXS5 423 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 CASS4Q9NQ75 786 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 POT1Q9NUX5 634 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 PDP2Q9P2J9 529 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 TTC7AQ9ULT0 858 aaPredicted RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
CBX1-206ENST00000581003 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
CBX1-206ENST00000581003 KNTC1P50748 2209 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 OR5K4A6NMS3 321 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 E7EVH7 732 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 TMX2-CTNND1H3BSU7 103 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 PRB1P04280 392 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 MTHFD1P11586 935 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 MSNP26038 577 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms