RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 UBA6A0AVT1 1052 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF185O15231 689 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IGHEP01854 428 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ALPPP05187 535 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MYBL1P10243 752 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CCNCP24863 283 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IL1R2P27930 398 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PER3P56645 1201 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IFI16Q16666 785 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SMTNL2Q2TAL5 461 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DNTTIP2Q5QJE6 756 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 LYPLAL1Q5VWZ2 237 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ENDOVQ8N8Q3 282 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ARRDC2Q8TBH0 407 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TM9SF4Q92544 642 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 C19orf60Q96EN9 201 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SGSM3Q96HU1 749 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MAP3K3Q99759 626 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SYT11Q9BT88 431 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TRIM7Q9C029 511 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CHST8Q9H2A9 424 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PCDH18Q9HCL0 1135 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ARFGAP3Q9NP61 516 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ASF1BQ9NVP2 202 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ENTPD4Q9Y227 616 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PKDREJQ9NTG1 2253 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 LGALS16A8MUM7 142 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MEN1O00255 615 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IPO13O94829 963 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZBTB11O95625 1053 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FTLP02792 175 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RARAP10276 462 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 POU3F2P20265 443 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IL4RP24394 825 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 UBXN1Q04323 297 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GALNT2Q10471 571 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GPS2Q13227 327 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PIGHQ14442 188 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PLCL1Q15111 1095 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 QPCTQ16769 361 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZGRF1Q86YA3 2104 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RAB43Q86YS6 212 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GPR26Q8NDV2 337 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZFPM2Q8WW38 1151 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF501Q96CX3 271 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TTC25Q96NG3 672 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TSGA13Q96PP4 275 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DPH2Q9BQC3 489 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FANCEQ9HB96 536 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SYTL2Q9HCH5 934 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 AGPAT4Q9NRZ5 378 aa11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-216ENST00000579853 A6NL46 340 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 KRT86O43790 486 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MX2P20592 715 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ADCY2Q08462 1091 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 KRT81Q14533 505 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IHHQ14623 411 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CCDC183Q5T5S1 534 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF648Q5T619 568 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ALS2CLQ60I27 953 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 OOSP2Q86WS3 158 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TRAPPC5Q8IUR0 188 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF547Q8IVP9 402 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DSELQ8IZU8 1212 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 BRSK1Q8TDC3 778 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 VPS35Q96QK1 796 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 C17orf62Q9BQA9 187 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZCCHC2Q9C0B9 1178 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ILKAPQ9H0C8 392 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NUP62CLQ9H1M0 184 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MAGEE1Q9HCI5 957 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 LIMA1Q9UHB6 759 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 BTRCQ9Y297 605 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PADI2Q9Y2J8 665 aa11.93□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HEATR9A2RTY3 570 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 OR5K3A6NET4 321 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HADHAP40939 763 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PPP1CAP62136 330 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CDK18Q07002 472 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DMPKQ09013 629 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PLEKHS1Q5SXH7 462 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms