RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DNMT3AQ9Y6K1 912 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 C17orf113A0A1B0GUU1 675 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 CACNB4O00305 520 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 RAD51BO15315 384 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 SGTAO43765 313 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 PLIN3O60664 434 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 MTX2O75431 263 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 ASMTLO95671 621 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 IGHV4-34P06331 123 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 DHRS4L1P0CG22 281 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 DGKAP23743 735 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 AOAHP28039 575 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 MDH1P40925 334 aaKnown RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 ETV4P43268 484 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 KIAA1024LP59773 190 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 IRF9Q00978 393 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 PLOD1Q02809 727 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 CSHL1Q14406 222 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 ZNF460Q14592 562 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 N4BP2L1Q5TBK1 243 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 LVRNQ6Q4G3 990 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 TMEM220Q6QAJ8 160 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 TMEM207Q6UWW9 146 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 CDHR3Q6ZTQ4 885 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 ZBTB2Q8N680 514 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 SIDT2Q8NBJ9 832 aaKnown RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 MDM1Q8TC05 714 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 FUBP1Q96AE4 644 aaKnown RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 CCDC97Q96F63 343 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 GPR78Q96P69 363 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 FAM111AQ96PZ2 611 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 MRPL57Q9BQC6 102 aaKnown RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 CCM2Q9BSQ5 444 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 GPR174Q9BXC1 333 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 OR2AG1Q9H205 316 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 PRMT8Q9NR22 394 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-202ENST00000578430 IGSF5Q9NSI5 407 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
SRSF1-202ENST00000578430 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 NUMA1Q14980 2115 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 IQCF5A8MTL0 148 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 CHUKO15111 745 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 BIRC5O15392 142 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 LAMTOR5O43504 91 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 NUAK1O60285 661 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 KCNJ13O60928 360 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 FSBPO95073 299 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 PROCP04070 461 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 MAPK9P45984 424 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 WDR4P57081 412 aaKnown RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 PFN3P60673 137 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 GBX1Q14549 363 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 NEK10Q6ZWH5 1172 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 DET1Q7L5Y6 550 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 TRIM42Q8IWZ5 723 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 RHEBL1Q8TAI7 183 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 ANKRD49Q8WVL7 239 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 DYDC1Q8WWB3 177 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 ASZ1Q8WWH4 475 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 FOXJ1Q92949 421 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 NXNL1Q96CM4 212 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 SCYL1Q96KG9 808 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 SARS2Q9NP81 518 aaKnown RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 TMEM216Q9P0N5 145 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
SRSF1-202ENST00000578430 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.29
SRSF1-202ENST00000578430 A0A1W2PPC4 97 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 OR2AG2A6NM03 316 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 METTL12A8MUP2 240 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 LIN7AO14910 233 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-202ENST00000578430 KMOO15229 486 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 PI15O43692 258 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 LILRB5O75023 590 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 TSPAN12O95859 305 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 MPC1LP0DKB6 136 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CD1DP15813 335 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 ZNF8P17098 575 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-202ENST00000578430 HTR1BP28222 390 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CCR7P32248 378 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 RABIFP47224 123 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 SERPINB4P48594 390 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CTSCP53634 463 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 PRKAA2P54646 552 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 DLG1Q12959 904 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 NFATC4Q14934 902 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-202ENST00000578430 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 ABI3BPQ7Z7G0 1075 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms