RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TSPAN7P41732 249 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 GDF10P55107 478 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 GFERP55789 205 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 RAB15P59190 212 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 PDE1BQ01064 536 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 KLF1Q13351 362 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 GPR18Q14330 331 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 NFE2L1Q14494 772 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 PARP6Q2NL67 630 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 AGAP9Q5VTM2 703 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 ZSCAN1Q8NBB4 408 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 SGF29Q96ES7 293 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 TGM7Q96PF1 710 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 TMEM121Q9BTD3 319 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 DDA1Q9BW61 102 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 ASPSCR1Q9BZE9 553 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 B3GNT4Q9C0J1 378 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 FAM96AQ9H5X1 160 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 UCK1Q9HA47 277 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 SMOXQ9NWM0 555 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 PDP2Q9P2J9 529 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 PCDHGA3Q9Y5H0 932 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 PRR19A6NJB7 356 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 KCNJ13O60928 360 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 RASSF9O75901 435 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 METTL18O95568 372 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 RALBP11234 206 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 TPH1P17752 444 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ITGALP20701 1170 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 HADHAP40939 763 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 SEPHS1P49903 392 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ATP1A2P50993 1020 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ARSDP51689 593 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 C19orf57Q0VDD7 668 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 SEPT6Q14141 434 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 LY6DQ14210 128 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 RPS6KA1Q15418 735 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 PCSK4Q6UW60 755 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 WASH2PQ6VEQ5 465 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 FAM83HQ6ZRV2 1179 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 DTX1Q86Y01 620 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 RBM12BQ8IXT5 1001 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 IL22RA1Q8N6P7 574 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 BMPERQ8N8U9 685 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 SNRNP27Q8WVK2 155 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ZNF514Q96K75 400 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 LRRC40Q9H9A6 602 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 WASH6PQ9NQA3 447 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 IMP3Q9NV31 184 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 PIH1D1Q9NWS0 290 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 OGFRQ9NZT2 677 aa12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 ZFC3H1O60293 1989 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-213ENST00000573519 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 MC4RP32245 332 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 LEPRP48357 1165 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF140P52738 457 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 XIAPP98170 497 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 MC2RQ01718 297 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 FOXM1Q08050 763 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 DMPKQ09013 629 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 POU6F1Q14863 301 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 PLCL1Q15111 1095 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 RPE65Q16518 533 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 P3H1Q32P28 736 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 MEI1Q5TIA1 1274 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 DENND5AQ6IQ26 1287 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 IRGCQ6NXR0 463 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 CEACAM20Q6UY09 585 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 FAM92BQ6ZTR7 304 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 CACNA2D3Q8IZS8 1091 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 GPR150Q8NGU9 434 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 TTC9Q92623 222 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 RSC1A1Q92681 617 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 NKD1Q969G9 470 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 ULK4Q96C45 1275 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 DNAJC1Q96KC8 554 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 ALS2CR12Q96Q35 445 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 TEFMQ96QE5 360 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 WWP1Q9H0M0 922 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 APMAPQ9HDC9 416 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 CFAP20Q9Y6A4 193 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms