RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CCDC183Q5T5S1 534 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 IZUMO3Q5VZ72 239 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 LCN10Q6JVE6 187 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 BPHLQ86WA6 291 aaPredicted RBP19.42■□□□□ 0.7
CCDC40-206ENST00000572083 RHOT1Q8IXI2 618 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 CCNYQ8ND76 341 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 PNPLA2Q96AD5 504 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TRIB3Q96RU7 358 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TUBB2BQ9BVA1 445 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 GPR63Q9BZJ6 419 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 RAD18Q9NS91 495 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 AIPL1Q9NZN9 384 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 IP6K2Q9UHH9 426 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TMPRSS11EQ9UL52 423 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 G3BP2Q9UN86 482 aaKnown RBP19.42■□□□□ 0.7
CCDC40-206ENST00000572083 UBA6A0AVT1 1052 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-206ENST00000572083 HSD11B2P80365 405 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 PCSK7Q16549 785 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 PRAMEF17Q5VTA0 474 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 KLHL35Q6PF15 583 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 ZNF517Q6ZMY9 492 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-206ENST00000572083 TMC3Q7Z5M5 1100 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 KMT5CQ86Y97 462 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 CPNE8Q86YQ8 564 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 TICAM1Q8IUC6 712 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 D2HGDHQ8N465 521 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 GDAP1Q8TB36 358 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 ZNF501Q96CX3 271 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-206ENST00000572083 CEP41Q9BYV8 373 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 THAP2Q9H0W7 228 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 GPR83Q9NYM4 423 aa19.41■□□□□ 0.7
CCDC40-206ENST00000572083 ANKRD17O75179 2603 aaKnown RBP19.41■□□□□ 0.7
CCDC40-206ENST00000572083 PCSK5Q92824 1860 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 SSU72P8A0A1W2PR75 194 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 DDX3YO15523 660 aaKnown RBP19.4■□□□□ 0.7
CCDC40-206ENST00000572083 TNFRSF8P28908 595 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 ITGA1P56199 1179 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 TMEM115Q12893 351 aaPredicted RBP19.4■□□□□ 0.7
CCDC40-206ENST00000572083 SLC10A2Q12908 348 aaPredicted RBP19.4■□□□□ 0.7
CCDC40-206ENST00000572083 GTF2H3Q13889 308 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 RPE65Q16518 533 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 ATP13A5Q4VNC0 1218 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 CNTD1Q8N815 330 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 HDAC11Q96DB2 347 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 SNRNP40Q96DI7 357 aaKnown RBP19.4■□□□□ 0.7
CCDC40-206ENST00000572083 ZNF670Q9BS34 389 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 MAGEE1Q9HCI5 957 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 BPIFA1Q9NP55 256 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 KCND1Q9NSA2 647 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 TCFL5Q9UL49 500 aa19.4■□□□□ 0.7
CCDC40-206ENST00000572083 OR5K3A6NET4 321 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 KLK3P07288 261 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 MX2P20592 715 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 VARSP26640 1264 aaKnown RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 VAV2P52735 878 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 HADHQ16836 314 aaKnown RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 FAM83HQ6ZRV2 1179 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 RBM43Q6ZSC3 357 aaKnown RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 HPS6Q86YV9 775 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 PQLC3Q8N755 202 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 KCTD6Q8NC69 237 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 C5orf34Q96MH7 638 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 VPS35Q96QK1 796 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 CD180Q99467 661 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 TLR10Q9BXR5 811 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 IMP3Q9NV31 184 aaKnown RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 ASF1BQ9NVP2 202 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 ANO10Q9NW15 660 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 SOHLH2Q9NX45 425 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 SLC5A6Q9Y289 635 aa19.39■□□□□ 0.69
CCDC40-206ENST00000572083 CFAP20Q9Y6A4 193 aaKnown RBP19.39■□□□□ 0.69
CCDC40-206ENST00000572083 AURKAO14965 403 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 CBX6O95503 412 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 ARCN1P48444 511 aaKnown RBP19.38■□□□□ 0.69
CCDC40-206ENST00000572083 GSDMDP57764 484 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 ABRQ12979 859 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 ATP1A4Q13733 1029 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 STX1AQ16623 288 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 FBXO38Q6PIJ6 1188 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 AMZ2Q86W34 360 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 SRRM1Q8IYB3 904 aaKnown RBP19.38■□□□□ 0.69
CCDC40-206ENST00000572083 DSELQ8IZU8 1212 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 IQCKQ8N0W5 287 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-206ENST00000572083 PPM1MQ96MI6 270 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 TTC25Q96NG3 672 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 RTN4Q9NQC3 1192 aaKnown RBP19.38■□□□□ 0.69
CCDC40-206ENST00000572083 HRASLS2Q9NWW9 162 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 SPO11Q9Y5K1 396 aa19.38■□□□□ 0.69
CCDC40-206ENST00000572083 MEN1O00255 615 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 GPR39O43194 453 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 LCA5LO95447 670 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 ZBTB11O95625 1053 aaPredicted RBP19.37■□□□□ 0.69
CCDC40-206ENST00000572083 RAB40ALP0C0E4 278 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 PBLDP30039 288 aaPredicted RBP19.37■□□□□ 0.69
CCDC40-206ENST00000572083 CTSCP53634 463 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 IFI35P80217 286 aaPredicted RBP19.37■□□□□ 0.69
CCDC40-206ENST00000572083 NFE2L1Q14494 772 aa19.37■□□□□ 0.69
CCDC40-206ENST00000572083 KYNUQ16719 465 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms