RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 C1GALT1C1Q96EU7 318 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 SLC35A4Q96G79 324 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 TAAR9Q96RI9 348 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 SLC22A12Q96S37 553 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 MRPL45Q9BRJ2 306 aaKnown RBP4.94□□□□□ -1.62
KARSP3-201ENST00000571212 PI4K2AQ9BTU6 479 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 STK33Q9BYT3 514 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
KARSP3-201ENST00000571212 VPS16Q9H269 839 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 SLC32A1Q9H598 525 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 CSNK1G1Q9HCP0 422 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 TRPC7Q9HCX4 862 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 AIPL1Q9NZN9 384 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 GCNT4Q9P109 453 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 KIAA1257Q9ULG3 409 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 MMP17Q9ULZ9 603 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 ZFHX4Q86UP3 3567 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 AKAP13Q12802 2813 aa4.94□□□□□ -1.62
KARSP3-201ENST00000571212 FAM92AA1XBS5 289 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 ERICH4A6NGS2 130 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 H0Y626 953 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 GOLGA6L19H0YKK7 550 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SH3BP5O60239 455 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 HUS1O60921 280 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 TRIM16O95361 564 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PAEPP09466 180 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SKILP12757 684 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 P4HA1P13674 534 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 TNNT1P13805 278 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 KELP23276 732 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CYP2F1P24903 491 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 EPHB2P29323 1055 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 RDXP35241 583 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 HOXD12P35452 270 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 OPRD1P41143 372 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 EIF2DP41214 584 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 P2RY2P41231 377 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PRKCIP41743 596 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 MAGEA11P43364 429 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 KLK7P49862 253 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 RAD23BP54727 409 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CDH8P55286 799 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 RWDD2BP57060 319 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SOX8P57073 446 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 TBX4P57082 545 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 TPM4P67936 248 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 UBXN1Q04323 297 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 BIRC3Q13489 604 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 BYSLQ13895 437 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PDCD2Q16342 344 aaPredicted RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 HSP90B2PQ58FF3 399 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PCID2Q5JVF3 399 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 AP1ARQ63HQ0 302 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 ANO7Q6IWH7 933 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 NAPRTQ6XQN6 538 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 LPCAT2Q7L5N7 544 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SLC29A4Q7RTT9 530 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 IRF2BP2Q7Z5L9 587 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PIP4P1Q86T03 277 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SRLQ86TD4 932 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 VSTM4Q8IW00 320 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 ADGRF2Q8IZF7 708 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 ARL14EPQ8N8R7 260 aaPredicted RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SLC4A11Q8NBS3 891 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 STKLD1Q8NE28 680 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 ATG4AQ8WYN0 398 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SYN2Q92777 582 aaPredicted RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 TWNKQ96RR1 684 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CYP2S1Q96SQ9 504 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 HNRNPABQ99729 332 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 NUP58Q9BVL2 599 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 NUSAP1Q9BXS6 441 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 UBXN6Q9BZV1 441 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 XPO4Q9C0E2 1151 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 LINC00597Q9H2U6 94 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 SMYD3Q9H7B4 428 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 WDR26Q9H7D7 661 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CISHQ9NSE2 258 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 DDX43Q9NXZ2 648 aaKnown RBP4.93□□□□□ -1.62
KARSP3-201ENST00000571212 IL37Q9NZH6 218 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 IFNKQ9P0W0 207 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CDH9Q9ULB4 789 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 CAPN11Q9UMQ6 739 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 MYH10P35580 1976 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 PCDH15Q96QU1 1955 aa4.93□□□□□ -1.62
KARSP3-201ENST00000571212 F8VZ95 297 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 QSOX1O00391 747 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 FOXN3O00409 490 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SLC9A3R1O14745 358 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SERPINC1P01008 464 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 GYPCP04921 128 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 KRT19P08727 400 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ACAT1P24752 427 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CDH5P33151 784 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 GNL1P36915 607 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PPP3CCP48454 512 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms