RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SCHIP1Q9P0W5 487 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 AAR2Q9Y312 384 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 B3GALT1Q9Y5Z6 326 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 MN1Q10571 1320 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 C2orf81A6NN90 581 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 GPR39O43194 453 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 WIPF1O43516 503 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A9O60656 530 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UBXN7O94888 489 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 PRAMEF1O95521 474 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 AGTP01019 485 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A6P19224 532 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A1P22309 533 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A4P22310 534 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 RPL10P27635 214 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 AKT1P31749 480 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A3P35503 534 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 HALP42357 657 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 DRG2P55039 364 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 LY6DQ14210 128 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 GPRC6AQ5T6X5 926 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 AGAP9Q5VTM2 703 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ANKS6Q68DC2 871 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ABRAXAS1Q6UWZ7 409 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 TMEM26Q6ZUK4 368 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 PEX26Q7Z412 305 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ARHGAP22Q7Z5H3 698 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 RBM12BQ8IXT5 1001 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 SYCE1Q8N0S2 351 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 IL22RA1Q8N6P7 574 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UBL4BQ8N7F7 174 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ALG3Q92685 438 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 SPATA13Q96N96 652 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 TEFMQ96QE5 360 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A7Q9HAW7 530 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A10Q9HAW8 530 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 UGT1A8Q9HAW9 530 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 SMOXQ9NWM0 555 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF624Q9P2J8 865 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 TRIM10Q9UDY6 481 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 ARL5AQ9Y689 179 aa12.15□□□□□ -0.46
CTDNEP1-205ENST00000570828 PRR19A6NJB7 356 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR52A4PA6NMU1 304 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 MIF4GDA9UHW6 222 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 KCNJ13O60928 360 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 PYGMP11217 842 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 BRAFP15056 766 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 TYRP1P17643 537 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 AMD1P17707 334 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 MSH3P20585 1137 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 LPOP22079 712 aaPredicted RBP12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 CAPZBP47756 277 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 ARSDP51689 593 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 GFERP55789 205 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 TAF1AQ15573 450 aaPredicted RBP12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 LONRF2Q1L5Z9 754 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 AADACL2Q6P093 401 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 WASH2PQ6VEQ5 465 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 C11orf96Q7Z7L8 435 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 CACNA2D3Q8IZS8 1091 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 CYP4X1Q8N118 509 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 BMPERQ8N8U9 685 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 RASGEF1AQ8N9B8 481 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 CCDC110Q8TBZ0 833 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 GORASP1Q9BQQ3 440 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZPBPQ9BS86 351 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 WASH6PQ9NQA3 447 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 AMFRQ9UKV5 643 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 PIEZO2Q9H5I5 2752 aa12.14□□□□□ -0.47
CTDNEP1-205ENST00000570828 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 C5orf60A6NFR6 353 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR2AG2A6NM03 316 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 GAPDHSO14556 408 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 RAD1O60671 282 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 RASSF9O75901 435 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 CRTAMO95727 393 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ITGB2P05107 769 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ANKRD34CP0C6C1 535 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 PBLDP30039 288 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ADRA1AP35348 466 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 CTSCP53634 463 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 PDE1BQ01064 536 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 MC2RQ01718 297 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 DMPKQ09013 629 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 OLIG2Q13516 323 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 GPR18Q14330 331 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 PTPRCAPQ14761 206 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 TMEM220Q6QAJ8 160 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms