RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 POC5Q8NA72 575 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 MCFD2Q8NI22 146 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 FBLIM1Q8WUP2 373 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 PABPC5Q96DU9 382 aaKnown RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 ZNF599Q96NL3 588 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 TP63Q9H3D4 680 aaPredicted RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 POPDC3Q9HBV1 291 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 AXIN1O15169 862 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 MAN1A2O60476 641 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 PEX10O60683 326 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 CNTN5O94779 1100 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 POLR2EP19388 210 aaKnown RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 PSMB9P28065 219 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 CYP2C18P33260 490 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 IST1P53990 364 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 MTPNP58546 118 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 MVKQ03426 396 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 OR4D1Q15615 310 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 ATP6AP1LQ52LC2 224 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 XKR7Q5GH72 579 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 ZC3H12BQ5HYM0 836 aaKnown RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 NECAB2Q7Z6G3 386 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 ARHGAP12Q8IWW6 846 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 FBXO16Q8IX29 292 aaPredicted RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 TOP6BLQ8N6T0 577 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 SLC47A1Q96FL8 570 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 ATOH8Q96SQ7 321 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 BTBD2Q9BX70 525 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 SPATC1LQ9H0A9 340 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 NEK6Q9HC98 313 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 SEMA4BQ9NPR2 832 aaPredicted RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 SCN3BQ9NY72 215 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 CENPBD1B2RD01 187 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 GABRDO14764 452 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 RECQL4O94761 1208 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CYP11A1P05108 521 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 UROSP10746 265 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 ZNF37AP17032 561 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 IL12AP29459 219 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 NR4A2P43354 598 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 TRPC1P48995 793 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 NCS1P62166 190 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 VAC14Q08AM6 782 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CATSPEREQ5SY80 951 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 OSTM1Q86WC4 334 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 FBXO39Q8N4B4 442 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 OR8J3Q8NGG0 315 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 OR5K1Q8NHB7 308 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CHAC2Q8WUX2 184 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 FIG4Q92562 907 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 LGALS12Q96DT0 336 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 DHRS1Q96LJ7 313 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 MMP27Q9H306 513 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 OSGIN1Q9UJX0 560 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CRYL1Q9Y2S2 319 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 TIMM22Q9Y584 194 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 COL1A2P08123 1366 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 MN1Q10571 1320 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 FAM172BPA6NC97 362 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 SUPT3HB4E1H0 165 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 IFRD1O00458 451 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 XPNPEP2O43895 674 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 PRKD3O94806 890 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 USP17L7P0C7H9 530 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 NKX2-5P52952 324 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 TUBA1BP68363 451 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CLCA4Q14CN2 919 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 NPTX1Q15818 432 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 DLEU7Q6UYE1 221 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 TUBA1AQ71U36 451 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 VASH1Q7L8A9 365 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 LDB1Q86U70 411 aaPredicted RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 CLIP4Q8N3C7 705 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 FBXO30Q8TB52 745 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CNIH3Q8TBE1 160 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 STAG3L4Q8TBR4 150 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 ZHX1-C8orf76Q96EF9 292 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 CATSPERBQ9H7T0 1116 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 KAT8Q9H7Z6 458 aaKnown RBP15.23■□□□□ 0.03
SMG6-207ENST00000570756 ACTR8Q9H981 624 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 ERVK-18Q9QC07 812 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 LIMD1Q9UGP4 676 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 PCDHGA10Q9Y5H3 936 aa15.23■□□□□ 0.03
SMG6-207ENST00000570756 ARNTLO00327 626 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 RAD51BO15315 384 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 FGF10O15520 208 aaPredicted RBP15.22■□□□□ 0.03
SMG6-207ENST00000570756 KERAO60938 352 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 LGALS2P05162 132 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 KRT8P05787 483 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 ITGAMP11215 1152 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 JUNDP17535 347 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 BMPR1AP36894 532 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 DGCR6Q14129 220 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 SELPLGQ14242 412 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 TTLL4Q14679 1199 aa15.22■□□□□ 0.03
SMG6-207ENST00000570756 PLEKHG6Q3KR16 790 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms