RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 GOLGA8MH3BSY2 632 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 SMAPO00193 183 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 NVLO15381 856 aaKnown RBP14.9□□□□□ -0.02
RAB40B-203ENST00000570676 PRAMEF10O60809 474 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 C1QL1O75973 258 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 TMEM63AO94886 807 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 SUN1O94901 812 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 AGTP01019 485 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 THRAP10827 490 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ZNF8P17098 575 aaPredicted RBP14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ADRA1AP35348 466 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 TNNT3P45378 269 aaPredicted RBP14.9□□□□□ -0.02
RAB40B-203ENST00000570676 CARSP49589 748 aaKnown RBP14.9□□□□□ -0.02
RAB40B-203ENST00000570676 SARNPP82979 210 aaKnown RBP14.9□□□□□ -0.02
RAB40B-203ENST00000570676 CAV1Q03135 178 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 SQSTM1Q13501 440 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 OLIG2Q13516 323 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 CUL1Q13616 776 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ARHGAP40Q5TG30 622 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 NKAIN2Q5VXU1 208 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 PDPK2PQ6A1A2 396 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ZDHHC24Q6UX98 284 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 USP53Q70EK8 1073 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ADGRG6Q86SQ4 1221 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 RCBTB1Q8NDN9 531 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ART4Q93070 314 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 GLYATL1Q969I3 302 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 CMKLR1Q99788 373 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 TBL1YQ9BQ87 522 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 APOL2Q9BQE5 337 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 GPR63Q9BZJ6 419 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 KCNK4Q9NYG8 393 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 TMEM9Q9P0T7 183 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 TMPRSS11EQ9UL52 423 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 ATRXP46100 2492 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 AHCTF1Q8WYP5 2266 aa14.9□□□□□ -0.02
RAB40B-203ENST00000570676 PRR19A6NJB7 356 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 C9orf172C9J069 976 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 K7ENP7 123 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 HGSO14964 777 aaPredicted RBP14.89□□□□□ -0.03
RAB40B-203ENST00000570676 CHUKO15111 745 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 TP73O15350 636 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 GRID2O43424 1007 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 PRB1P04280 392 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 LIPCP11150 499 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 CHRNA4P43681 627 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 LIMK2P53671 638 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 GPLD1P80108 840 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 VAC14Q08AM6 782 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 BIRC2Q13490 618 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 KHDC1Q4VXA5 237 aaKnown RBP14.89□□□□□ -0.03
RAB40B-203ENST00000570676 INO80CQ6PI98 192 aaPredicted RBP14.89□□□□□ -0.03
RAB40B-203ENST00000570676 LINC00523Q86TU6 105 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 PHYKPLQ8IUZ5 450 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 TTC30BQ8N4P2 665 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 SLC25A41Q8N5S1 370 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 LSM14AQ8ND56 463 aaKnown RBP14.89□□□□□ -0.03
RAB40B-203ENST00000570676 MCUQ8NE86 351 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 OR4D9Q8NGE8 314 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 FBXO25Q8TCJ0 367 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 SLC39A7Q92504 469 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 PMEPA1Q969W9 287 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 FAM129AQ9BZQ8 928 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 OR2AG1Q9H205 316 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 SARS2Q9NP81 518 aaKnown RBP14.89□□□□□ -0.03
RAB40B-203ENST00000570676 RAD18Q9NS91 495 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 ZDHHC18Q9NUE0 388 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 NFU1Q9UMS0 254 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 BPTFQ12830 3046 aa14.89□□□□□ -0.03
RAB40B-203ENST00000570676 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 GPR89AB7ZAQ6 455 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 ERVH48-1M5A8F1 160 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 TK2O00142 265 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 ZW10O43264 779 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 CTIFO43310 598 aaKnown RBP14.88□□□□□ -0.03
RAB40B-203ENST00000570676 MTX2O75431 263 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 SLC25A14O95258 325 aaPredicted RBP14.88□□□□□ -0.03
RAB40B-203ENST00000570676 EPOP01588 193 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 GPR89BP0CG08 455 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 CCL4P13236 92 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 F3P13726 295 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 HMGCLP35914 325 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 GRIA1P42261 906 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 ARSDP51689 593 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 CLCNKAP51800 687 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 MAPK10P53779 464 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 VSNL1P62760 191 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 HHEXQ03014 270 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 TRA2AQ13595 282 aaKnown RBP eCLIP14.88□□□□□ -0.03
RAB40B-203ENST00000570676 TGIF1Q15583 401 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 SIRPB2Q5JXA9 342 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 RANBP10Q6VN20 620 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 OR52K1Q8NGK4 314 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 TTC9Q92623 222 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 USP7Q93009 1102 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 VPS35Q96QK1 796 aa14.88□□□□□ -0.03
RAB40B-203ENST00000570676 SRPK1Q96SB4 655 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms