RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KLHL41O60662 606 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 MAFKO60675 156 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 KLF7O75840 302 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 CALB1P05937 261 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 TSFMP43897 325 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 MMP13P45452 471 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 NSFP46459 744 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 EPHB1P54762 984 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 SOX8P57073 446 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 DPYSQ14117 519 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 HIF1AQ16665 826 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 PTCHD3Q3KNS1 767 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 VWA3BQ502W6 1294 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 PPP6R3Q5H9R7 873 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 ERMARDQ5T6L9 678 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 AGAP9Q5VTM2 703 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 DNAJC24Q6P3W2 148 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 FBXO38Q6PIJ6 1188 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 MON1BQ7L1V2 547 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 MRGPRGQ86SM5 289 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 CDH24Q86UP0 819 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF547Q8IVP9 402 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 BBS5Q8N3I7 341 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 GPR150Q8NGU9 434 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 CD180Q99467 661 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 EIF3CQ99613 913 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 SLX1AQ9BQ83 275 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 TIMM29Q9BSF4 260 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 CWC15Q9P013 229 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 CHKBQ9Y259 395 aa10.19□□□□□ -0.78
CTDNEP1-202ENST00000570380 C1orf232A0A0U1RR37 186 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 OR5K3A6NET4 321 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 GPR89AB7ZAQ6 455 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 LDB2O43679 373 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 SLC25A14O95258 325 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZBTB11O95625 1053 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PRLP01236 227 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 GPR89BP0CG08 455 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 IDSP22304 550 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 HADHAP40939 763 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 HCAR3P49019 387 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 SSPNQ14714 243 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PLCL1Q15111 1095 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 CLEC16AQ2KHT3 1053 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF789Q5FWF6 425 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 VWA2Q5GFL6 755 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 MARC1Q5VT66 337 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 DUS1LQ6P1R4 473 aaKnown RBP10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 KLHL35Q6PF15 583 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 CYP4V2Q6ZWL3 525 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 LRRTM4Q86VH4 590 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PPP4R1Q8TF05 950 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 CCDC120Q96HB5 630 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PPM1MQ96MI6 270 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 IP6K3Q96PC2 410 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 LYSMD1Q96S90 227 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 TLR10Q9BXR5 811 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 ACTR5Q9H9F9 607 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 NT5MQ9NPB1 228 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 ETNK2Q9NVF9 386 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 HRASLS2Q9NWW9 162 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 P4HTMQ9NXG6 502 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PKD2L2Q9NZM6 624 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 PCSK1NQ9UHG2 260 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 DNPEPQ9ULA0 475 aa10.18□□□□□ -0.78
CTDNEP1-202ENST00000570380 RGSL1A5PLK6 1076 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 PEX12O00623 359 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 JRKO75564 520 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 CAPN3P20807 821 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 AMPD1P23109 780 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 SSTR2P30874 369 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 KCNK10P57789 538 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 OTUD4Q01804 1114 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 ITKQ08881 620 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 CDC16Q13042 620 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 RPE65Q16518 533 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 KHDC1Q4VXA5 237 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 TMTC4Q5T4D3 741 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF385CQ66K41 422 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 IGFL2Q6UWQ7 119 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 C11orf96Q7Z7L8 435 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF808Q8N4W9 903 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 TEX26Q8N6G2 289 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 OR1L3Q8NH93 324 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 DNAJB14Q8TBM8 379 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 EID2BQ96D98 161 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 SPATA16Q9BXB7 569 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 TDRD1Q9BXT4 1180 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 BTRCQ9Y297 605 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 PADI2Q9Y2J8 665 aa10.17□□□□□ -0.78
CTDNEP1-202ENST00000570380 CCDC78A2IDD5 438 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 C9J4A7 227 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 MTX2O75431 263 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 NADKO95544 446 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 IGHEP01854 428 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 KPNA2P52292 529 aaKnown RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 CDH6P55285 790 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms