RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MYH9P35579 1960 aaKnown RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CFAP54Q96N23 3096 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 IGLV3-22A0A075B6J6 115 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 LOC102723996A0A087X1L8 192 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 A0A0U1RQF3 1178 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ARHGEF37A1IGU5 675 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 A4D1N5 150 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PRR23AA6NEV1 266 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 A6NL46 340 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TTC34A8MYJ7 566 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MCIDASD6RGH6 385 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ASAP2O43150 1006 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ZBTB14O43829 449 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 B4GALT3O60512 393 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PRAMEF2O60811 474 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 KINO60870 393 aaKnown RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TADA2AO75478 443 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SLC25A12O75746 678 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TPPPO94811 219 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CCNE2O96020 404 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PNPP00491 289 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ADAP00813 363 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SERPINC1P01008 464 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PDGFBP01127 241 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SLC4A1P02730 911 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 HOXB5P09067 269 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 KRT10P13645 584 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PPP3CBP16298 524 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SFPQP23246 707 aaKnown RBP eCLIP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PTPN9P43378 593 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CCR10P46092 362 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 GSK3AP49840 483 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CLCN5P51795 746 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 VAV2P52735 878 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 GALCP54803 685 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 NAPAP54920 295 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 EVCP57679 992 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 GPC5P78333 572 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SHC2P98077 582 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SLC14A1Q13336 389 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TUBB2AQ13885 445 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 GIT2Q14161 759 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 FGFBP1Q14512 234 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SEMA3AQ14563 771 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PPA1Q15181 289 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 RNPS1Q15287 305 aaKnown RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 HIST2H2ACQ16777 129 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MEP1BQ16820 701 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ALG11Q2TAA5 492 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PCGF3Q3KNV8 242 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ZRANB3Q5FWF4 1079 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 NHSL2Q5HYW2 709 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TEDDM1Q5T9Z0 273 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PLPP4Q5VZY2 271 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 DENND2CQ68D51 928 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MIS18BP1Q6P0N0 1132 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CFAP77Q6ZQR2 320 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PRR23BQ6ZRT6 265 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 LINC00696Q6ZRV3 163 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MOB3CQ70IA8 216 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 BTN2A1Q7KYR7 527 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 RNF144BQ7Z419 303 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SLC9B2Q86UD5 537 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 LCA5Q86VQ0 697 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 FAM228AQ86W67 206 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PLA2G4DQ86XP0 818 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ECHDC2Q86YB7 292 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CCDC60Q8IWA6 550 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TUSC5Q8IXB3 177 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 FAM217AQ8IXS0 508 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SIX6OS1Q8N1H7 587 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SLC39A11Q8N1S5 342 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 D2HGDHQ8N465 521 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 DPP10Q8N608 796 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 LINC01465Q8N7H1 131 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 C12orf76Q8N812 135 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TMEM105Q8N8V8 129 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SCAIQ8N9R8 606 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 B3GALNT2Q8NCR0 500 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MCUQ8NE86 351 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 DNAAF1Q8NEP3 725 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PTPMT1Q8WUK0 201 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 KCNE4Q8WWG9 221 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CRYGNQ8WXF5 182 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 AKAP1Q92667 903 aaKnown RBP eCLIP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 TAF4BQ92750 862 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 MR1Q95460 341 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 PTERQ96BW5 349 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ARHGEF26Q96DR7 871 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ELMOD3Q96FG2 381 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 FAM84AQ96KN4 292 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 AK8Q96MA6 479 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 DACH2Q96NX9 599 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 CASD1Q96PB1 797 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 FYTTD1Q96QD9 318 aaKnown RBP3.23□□□□□ -1.89
CNOT1-221ENST00000569924 LRRC37BQ96QE4 947 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 SNX18Q96RF0 628 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 GAD1Q99259 594 aa3.23□□□□□ -1.89
CNOT1-221ENST00000569924 ATP6V0BQ99437 205 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms