RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF547Q8IVP9 402 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 GPBAR1Q8TDU6 330 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 ASZ1Q8WWH4 475 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 TSACCQ96A04 125 aaPredicted RBP23.09■■□□□ 1.29
RAB40C-212ENST00000569575 MTBPQ96DY7 904 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 TSPAN17Q96FV3 270 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 PDXPQ96GD0 296 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 PAFAH2Q99487 392 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 POPDC3Q9HBV1 291 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 APOBEC3BQ9UH17 382 aaKnown RBP23.09■■□□□ 1.29
RAB40C-212ENST00000569575 ACSL5Q9ULC5 683 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 VWA7Q9Y334 891 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 PSAT1Q9Y617 370 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 RALGAPA1Q6GYQ0 2036 aa23.09■■□□□ 1.29
RAB40C-212ENST00000569575 LRP4O75096 1905 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 KNL1Q8NG31 2342 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 A0A1B0GTQ1 180 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 E5RI56 91 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 EIF3FO00303 357 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-212ENST00000569575 VPS26AO75436 327 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 POP7O75817 140 aaKnown RBP23.08■■□□□ 1.29
RAB40C-212ENST00000569575 KRT37O76014 449 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 FUCA1P04066 466 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 ATXN3P54252 364 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-212ENST00000569575 ARHGAP8P85298 464 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 BNC1Q01954 994 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 HLA-BQ31612 363 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 ZNF648Q5T619 568 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-212ENST00000569575 LRRC8EQ6NSJ5 796 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 KDM7AQ6ZMT4 941 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 C11orf96Q7Z7L8 435 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 HM13Q8TCT9 377 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 GPR22Q99680 433 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 GPSM3Q9Y4H4 160 aa23.08■■□□□ 1.29
RAB40C-212ENST00000569575 TPP1O14773 563 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 CDH16O75309 829 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 APOA4P06727 396 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 CHRM3P20309 590 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 IRX4P78413 519 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 IFFO1Q0D2I5 559 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 TMED2Q15363 201 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 INSCQ1MX18 579 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 TTLL9Q3SXZ7 439 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 ZNF789Q5FWF6 425 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 CTSL3PQ5NE16 218 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 PLEKHS1Q5SXH7 462 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 WASH2PQ6VEQ5 465 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 DET1Q7L5Y6 550 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 RD3Q7Z3Z2 195 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 GKN2Q86XP6 184 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 IQCKQ8N0W5 287 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 MRPL40Q9NQ50 206 aaKnown RBP23.07■■□□□ 1.28
RAB40C-212ENST00000569575 WASH6PQ9NQA3 447 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 PCDHGB2Q9Y5G2 931 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 PRSS21Q9Y6M0 314 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 PCDH15Q96QU1 1955 aa23.07■■□□□ 1.28
RAB40C-212ENST00000569575 UQCRHLA0A096LP55 91 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 IQANK1A0A1B0GTG1 560 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 POC1B-GALNT4F8VUJ3 575 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 PCDHGA12O60330 932 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 UQCRHP07919 91 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 ITGA2BP08514 1039 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 CBSLP0DN79 551 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 SLC2A4P14672 509 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 ATP5DP30049 168 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 CBSP35520 551 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 MAPK9P45984 424 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 CCT8P50990 548 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 SLC12A2P55011 1212 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 SUZ12Q15022 739 aaKnown RBP23.06■■□□□ 1.28
RAB40C-212ENST00000569575 METRNLQ641Q3 311 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 LAYNQ6UX15 382 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 LRIG3Q6UXM1 1119 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 CHST15Q7LFX5 561 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-212ENST00000569575 OTOAQ7RTW8 1153 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 DPEP2Q9H4A9 486 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 GAREM1Q9H706 876 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 SYTL2Q9HCH5 934 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 PSMC3IPQ9P2W1 217 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-212ENST00000569575 PCOLCE2Q9UKZ9 415 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 DHRS7Q9Y394 339 aa23.06■■□□□ 1.28
RAB40C-212ENST00000569575 TP53BP1Q12888 1972 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-212ENST00000569575 FAM95CA0A1B0GW59 222 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 PRR19A6NJB7 356 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 PIAS2O75928 621 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 SNRPAP09012 282 aaKnown RBP23.05■■□□□ 1.28
RAB40C-212ENST00000569575 ENGP17813 658 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 IDSP22304 550 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 AOAHP28039 575 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 SLC14A1Q13336 389 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 SMAD1Q15797 465 aaKnown RBP23.05■■□□□ 1.28
RAB40C-212ENST00000569575 HECTD2Q5U5R9 776 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 AGAP9Q5VTM2 703 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 ZNF549Q6P9A3 640 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 CRTC3Q6UUV7 619 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 AVL9Q8NBF6 648 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 DCAKDQ8WVC6 231 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 INPP5DQ92835 1189 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 SEMA4GQ9NTN9 838 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 DNAAF2Q9NVR5 837 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms