RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 APCDD1Q8J025 514 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 OR2T11Q8NH01 316 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 RHEBL1Q8TAI7 183 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CD200R1Q8TD46 325 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 SKA2Q8WVK7 121 aaPredicted RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 EID2BQ96D98 161 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF599Q96NL3 588 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 TRAPPC9Q96Q05 1148 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 VN1R3Q9BXE9 311 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CIPCQ9C0C6 399 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 DERL2Q9GZP9 239 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CMTM6Q9NX76 183 aa8.66□□□□□ -1.02
LINC00558-201ENST00000569422 MRPS23Q9Y3D9 190 aaKnown RBP8.66□□□□□ -1.02
LINC00558-201ENST00000569422 CCDC154A6NI56 674 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 PLOD2O00469 737 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CD160O95971 181 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 FESP07332 822 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CAPN1P07384 714 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 FAM58BPP0C7Q3 252 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CR2P20023 1033 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 OXTRP30559 389 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 HSPA7P48741 367 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 TTPAP49638 278 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CYP4F8P98187 520 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 NFKB2Q00653 900 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 TGFBIQ15582 683 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CYP51A1Q16850 503 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 DNAJB7Q7Z6W7 309 aaPredicted RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 NKAPQ8N5F7 415 aaKnown RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 FATE1Q969F0 183 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 LRRC58Q96CX6 371 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CAPNS2Q96L46 248 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 DEFB118Q96PH6 123 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 SMG9Q9H0W8 520 aaKnown RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ASB8Q9H765 288 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CREBZFQ9NS37 354 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CD300AQ9UGN4 299 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 YIPF1Q9Y548 306 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CDH23Q9H251 3354 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 C1orf232A0A0U1RR37 186 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 A6NCN8 305 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 SOCS2O14508 198 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 AHCYL1O43865 530 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CLDN7O95471 211 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 PRAMEF1O95521 474 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF26P17031 533 aaPredicted RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CLCN2P51788 898 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ERVPABLB-1P60509 514 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ATP6V0D1P61421 351 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ZXDBP98169 803 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 NR6A1Q15406 480 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ARMC12Q5T9G4 340 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 SLC2A7Q6PXP3 512 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 GPRIN3Q6ZVF9 776 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 MILR1Q7Z6M3 343 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 GALNT7Q86SF2 657 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 PHYKPLQ8IUZ5 450 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 LRRC43Q8N309 656 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CATSPER1Q8NEC5 780 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 PPM1MQ96MI6 270 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 C17orf80Q9BSJ5 609 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 EFHD1Q9BUP0 239 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 HIPK3Q9H422 1215 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 MRPL40Q9NQ50 206 aaKnown RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 INTS7Q9NVH2 962 aaKnown RBP8.65□□□□□ -1.02
LINC00558-201ENST00000569422 VPS51Q9UID3 782 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 PCTPQ9UKL6 214 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CLEC4EQ9ULY5 219 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 CPQQ9Y646 472 aa8.65□□□□□ -1.02
LINC00558-201ENST00000569422 ARHGAP10A1A4S6 786 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 PFDN6O15212 129 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 F11P03951 625 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 CKMP06732 381 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 FGF4P08620 206 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 SLC6A2P23975 617 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 SUOXP51687 545 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 DGKQP52824 942 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 CDH15P55291 814 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 NOGQ13253 232 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 IKBKEQ14164 716 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 VEPH1Q14D04 833 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 NADK2Q4G0N4 442 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 LETMD1Q6P1Q0 360 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 FAM126BQ8IXS8 530 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 MARVELD2Q8N4S9 558 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 CBR4Q8N4T8 237 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 OR56A4Q8NGH8 313 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 OR2T3Q8NH03 318 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF461Q8TAF7 563 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 FEM1AQ9BSK4 669 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
LINC00558-201ENST00000569422 FAM192AQ9GZU8 254 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 NSUN3Q9H649 340 aaKnown RBP8.65□□□□□ -1.03
LINC00558-201ENST00000569422 ZFP14Q9HCL3 533 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 DDX18Q9NVP1 670 aaKnown RBP8.65□□□□□ -1.03
LINC00558-201ENST00000569422 ZNHIT2Q9UHR6 403 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms