RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 CHRNB1P11230 501 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 HLA-EP13747 358 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MTHFD2P13995 350 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 GM2AP17900 193 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 VCLP18206 1134 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 UGT1A6P19224 532 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MSH3P20585 1137 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 UGT1A1P22309 533 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 UGT1A4P22310 534 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 DRD3P35462 400 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 UGT1A3P35503 534 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 UGT1A5P35504 534 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 GGT5P36269 586 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 PIK3CGP48736 1102 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 CDKN1CP49918 316 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 HNMTP50135 292 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 DGKEP52429 567 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 COPAP53621 1224 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 AP1S2P56377 157 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 HERVK_113P63132 956 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 IRF9Q00978 393 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 TMEM115Q12893 351 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 LRRC32Q14392 662 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SETDB1Q15047 1291 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 ACOX1Q15067 660 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 PCBP2Q15366 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 RNF165Q6ZSG1 346 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 EFL1Q7Z2Z2 1120 aaKnown RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 LDB1Q86U70 411 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 TMPRSS6Q8IU80 811 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MYO1HQ8N1T3 1032 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 ZBTB2Q8N680 514 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 FUBP1Q96AE4 644 aaKnown RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 NUS1Q96E22 293 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 COX14Q96I36 57 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SMIM14Q96QK8 99 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 NDNQ99608 321 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 RIOK2Q9BVS4 552 aaKnown RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 ERVK-6Q9BXR3 956 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 TRIM54Q9BYV2 358 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 PCED1AQ9H1Q7 454 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 DPEP2Q9H4A9 486 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SGK2Q9HBY8 427 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MLXIPLQ9NP71 852 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SAR1AQ9NR31 198 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 ZNF358Q9NW07 568 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 TMEM45AQ9NWC5 275 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 NUDT4Q9NZJ9 180 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 DLGAP2Q9P1A6 1054 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 CNOT6Q9ULM6 557 aaKnown RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MMP17Q9ULZ9 603 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 SIT1Q9Y3P8 196 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 MUC22E2RYF6 1773 aaPredicted RBP9.37□□□□□ -0.91
LINC00555-201ENST00000569288 PLXND1Q9Y4D7 1925 aa9.37□□□□□ -0.91
LINC00555-201ENST00000569288 ZNF106Q9H2Y7 1883 aaKnown RBP9.36□□□□□ -0.91
LINC00555-201ENST00000569288 GOLGA8QA0A0J9YX86 632 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 GOLGA8OA6NCC3 632 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 TRPC5OSA6NMA1 111 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 FAM170BA6NMN3 283 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 GOLGA8NF8WBI6 632 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 NEMP1O14524 444 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 CHUKO15111 745 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 RAD51BO15315 384 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 HDAC3O15379 428 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ADAM23O75077 832 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 C6P13671 934 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 SAT1P21673 171 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 TARSP26639 723 aaKnown RBP9.36□□□□□ -0.91
LINC00555-201ENST00000569288 OXTRP30559 389 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ETV3P41162 512 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 SOX9P48436 509 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 PRLHRP49683 370 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 NUMBP49757 651 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 RPL14P50914 215 aaKnown RBP9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ARFIP2P53365 341 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 NAGLUP54802 743 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 B4GALNT1Q00973 533 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ZNF33BQ06732 778 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 DMTNQ08495 405 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 C2orf27AQ580R0 203 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 CFAP157Q5JU67 520 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 TMEM31Q5JXX7 168 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ANKS6Q68DC2 871 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 SULT1C3Q6IMI6 304 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 PNCKQ6P2M8 343 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
LINC00555-201ENST00000569288 SYT13Q7L8C5 426 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 TRIM69Q86WT6 500 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 GPSM1Q86YR5 675 aa9.36□□□□□ -0.91
LINC00555-201ENST00000569288 HDDC3Q8N4P3 179 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms