RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HMGCS1Q01581 520 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 PFKPQ01813 784 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 DGKKQ5KSL6 1271 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 SNAP47Q5SQN1 464 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 FAM83AQ86UY5 434 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 C7orf57Q8NEG2 295 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 DUSP16Q9BY84 665 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 CATSPERZQ9NTU4 200 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
PALB2-206ENST00000568219 MAP10Q9P2G4 905 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 UGT2A1Q9Y4X1 527 aa10.79□□□□□ -0.68
PALB2-206ENST00000568219 A0A1W2PQ67 120 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SLC1A7O00341 560 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CXCR6O00574 342 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TLR5O60602 858 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 NPM3O75607 178 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 ATP6V1E1P36543 226 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 EFEMP1Q12805 493 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SMN1Q16637 294 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 ZNF678Q5SXM1 525 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SYCE2Q6PIF2 218 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ELMOD2Q8IZ81 293 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ASB2Q96Q27 587 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CGREF1Q99674 301 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 GPR21Q99679 349 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TRIT1Q9H3H1 467 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 DSN1Q9H410 356 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 RMND5AQ9H871 391 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 MEAF6Q9HAF1 191 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TIGARQ9NQ88 270 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ZNF214Q9UL59 606 aaPredicted RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 OR6C70A6NIJ9 312 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 FAM25AB3EWG3 89 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 FAM25CB3EWG5 89 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 FAM25GB3EWG6 89 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 C19orf81C9J6K1 198 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CDC7O00311 574 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 VPS4BO75351 444 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 BEST1O76090 585 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 STBD1O95210 358 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CYP11A1P05108 521 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 PFKMP08237 780 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 G6PDP11413 515 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 PROZP22891 400 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CD68P34810 354 aaPredicted RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 CCT3P49368 545 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 VPS72Q15906 364 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SDHAF4Q5VUM1 108 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 MMAAQ8IVH4 418 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 FUNDC1Q8IVP5 155 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ZDHHC21Q8IVQ6 265 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 C19orf18Q8NEA5 215 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 DNERQ8NFT8 737 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 DHRS1Q96LJ7 313 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ZFP42Q96MM3 310 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SP140LQ9H930 580 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 WDR6Q9NNW5 1121 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 RCOR3Q9P2K3 495 aaPredicted RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 MALT1Q9UDY8 824 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SCAMP3O14828 347 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 DFNA5O60443 496 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SULT1C4O75897 302 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SNX4O95219 450 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 IQCF3P0C7M6 154 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TGFB3P10600 412 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CRHBPP24387 322 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 GSTM2P28161 218 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CYP4F8P98187 520 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 IL18R1Q13478 541 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 UNC50Q53HI1 259 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TECRLQ5HYJ1 363 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 TIGD7Q6NT04 549 aaPredicted RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 MAMDC4Q6UXC1 1216 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 CYP4V2Q6ZWL3 525 aaPredicted RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 OR13C4Q8NGS5 318 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 OR13J1Q8NGT2 312 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 HDAC2Q92769 488 aaKnown RBP10.78□□□□□ -0.68
PALB2-206ENST00000568219 PCYT2Q99447 389 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 C8orf4Q9NR00 106 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 ANKMY1Q9P2S6 941 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 KLHL3Q9UH77 587 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 RAPGEFL1Q9UHV5 662 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 NUP205Q92621 2012 aa10.78□□□□□ -0.68
PALB2-206ENST00000568219 SERPINI2O75830 405 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 IL2P60568 153 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.68
PALB2-206ENST00000568219 TIGD6Q17RP2 521 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 C9orf57Q5W0N0 161 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 SLC27A1Q6PCB7 646 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 KBTBD8Q8NFY9 601 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 GPR20Q99678 358 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 SLC39A8Q9C0K1 460 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 SPATC1LQ9H0A9 340 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 TMEM98Q9Y2Y6 226 aa10.77□□□□□ -0.68
PALB2-206ENST00000568219 MYBPHLA2RUH7 354 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 SAGE2PA6NJ88 616 aa10.77□□□□□ -0.69
PALB2-206ENST00000568219 DYRK3O43781 588 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms