RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DNAJB1P25685 340 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 HADHAP40939 763 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 GARSP41250 739 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 GLUD2P49448 558 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 TAF6P49848 677 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PRKAA2P54646 552 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CDH8P55286 799 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 HDAC4P56524 1084 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 YWHAZP63104 245 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 KCNJ2P63252 427 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 IGBP1P78318 339 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 UBE3AQ05086 875 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ZBTB16Q05516 673 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF33AQ06730 810 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PDK1Q15118 436 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SLC1A5Q15758 541 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ZBTB6Q15916 424 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 KBTBD12Q3ZCT8 623 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 XKR4Q5GH76 650 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 C9orf57Q5W0N0 161 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 LRRC8BQ6P9F7 803 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PCSK4Q6UW60 755 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SH2D5Q6ZV89 423 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CYP4V2Q6ZWL3 525 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 MARK2Q7KZI7 788 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CATSPER4Q7RTX7 472 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 FAM228AQ86W67 206 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CRLF3Q8IUI8 442 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 WDR75Q8IWA0 830 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 UNC45BQ8IWX7 931 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CTAGE3PQ8IX95 158 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 NME8Q8N427 588 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PQLC3Q8N755 202 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 MAB21L3Q8N8X9 362 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CPEB3Q8NE35 698 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 APPL2Q8NEU8 664 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 TFB1MQ8WVM0 346 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 HTR3CQ8WXA8 447 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 NTAN1Q96AB6 310 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 NSL1Q96IY1 281 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SPATA13Q96N96 652 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 OLFM3Q96PB7 478 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PEBP4Q96S96 227 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 EBNA1BP2Q99848 306 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 BTBD10Q9BSF8 475 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 C16orf70Q9BSU1 422 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SNRNP25Q9BV90 132 aaKnown RBP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SNX25Q9H3E2 840 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 RNPEPQ9H4A4 650 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 DCLRE1BQ9H816 532 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 MINDY3Q9H8M7 445 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 RNPEPL1Q9HAU8 725 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 POPDC2Q9HBU9 364 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SLC38A7Q9NVC3 462 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 NSMCE4AQ9NXX6 385 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.32□□□□□ -1.56
CAPN3-217ENST00000567817 IGSF9Q9P2J2 1179 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 TXNDC16Q9P2K2 825 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 HMGXB4Q9UGU5 601 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 DCDC2Q9UHG0 476 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 ADAM28Q9UKQ2 775 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 CHMP2BQ9UQN3 213 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 PLLPQ9Y342 182 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SPEF1Q9Y4P9 236 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 SNX9Q9Y5X1 595 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 NLRC5Q86WI3 1866 aa5.32□□□□□ -1.56
CAPN3-217ENST00000567817 A0A1W2PPM1 405 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MBLAC1A4D2B0 266 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SDR42E2A6NKP2 422 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 KPNA7A9QM74 516 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 TRIM49D1C9J1S8 452 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PIRO00625 290 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 GRM6O15303 877 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PSMD3O43242 534 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 PAPSS1O43252 624 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 B3GALT2O43825 422 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MAGEC1O60732 1142 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 HUS1O60921 280 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 CSDE1O75534 798 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DAB1O75553 588 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 ANP32DO95626 131 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 F9P00740 461 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 CFIP05156 583 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MMP3P08254 477 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DLDP09622 509 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DARSP14868 501 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 WARSP23381 471 aaKnown RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 IL4RP24394 825 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 DDX6P26196 483 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 RBL1P28749 1068 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 LRPAP1P30533 357 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 HTR7P34969 479 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINB6P35237 376 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 GCKP35557 465 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 GNL1P36915 607 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-217ENST00000567817 MATKP42679 507 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 HCAR3P49019 387 aa5.31□□□□□ -1.56
CAPN3-217ENST00000567817 CTXN1P60606 82 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms