RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CEP112Q8N8E3 955 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 GPR150Q8NGU9 434 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 OR2L2Q8NH16 312 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 MAPK15Q8TD08 544 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 TCF12Q99081 682 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 WASH6PQ9NQA3 447 aa25.69■■□□□ 1.7
NME3-209ENST00000566600 SPTBN2O15020 2390 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 C17orf113A0A1B0GUU1 675 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 A6NCN8 305 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 TP73O15350 636 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 ZW10O43264 779 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 OR56A5P0C7T3 313 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 ARNTP27540 789 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 MSS51Q4VC12 460 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 RAB44Q7Z6P3 723 aaPredicted RBP25.68■■□□□ 1.7
NME3-209ENST00000566600 SFRP1Q8N474 314 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 CLDN19Q8N6F1 224 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 FCRL3Q96P31 734 aaPredicted RBP25.68■■□□□ 1.7
NME3-209ENST00000566600 CCM2Q9BSQ5 444 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 ABCG4Q9H172 646 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 STN1Q9H668 368 aaKnown RBP25.68■■□□□ 1.7
NME3-209ENST00000566600 PRDM8Q9NQV8 689 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 MARCH4Q9P2E8 410 aaPredicted RBP25.68■■□□□ 1.7
NME3-209ENST00000566600 LRIT1Q9P2V4 623 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 FAM169AQ9Y6X4 670 aa25.68■■□□□ 1.7
NME3-209ENST00000566600 ZCWPW2A0A1B0GU75 182 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 PDZK1P1A8MUH7 402 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 PBLDP30039 288 aaPredicted RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 DRG2P55039 364 aaKnown RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 MAZP56270 477 aaKnown RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 THOC5Q13769 683 aaKnown RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 SEMA3AQ14563 771 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 LONRF1Q17RB8 773 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 RNF187Q5TA31 235 aaPredicted RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 NEPROQ6NW34 567 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 ABRAXAS1Q6UWZ7 409 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 SFTPA2Q8IWL1 248 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 LMNTD2Q8IXW0 634 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.67■■□□□ 1.7
NME3-209ENST00000566600 WDR48Q8TAF3 677 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 HM13Q8TCT9 377 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 PATE1Q8WXA2 126 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 CCDC74AQ96AQ1 378 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 CCDC97Q96F63 343 aaPredicted RBP25.67■■□□□ 1.7
NME3-209ENST00000566600 LRRC1Q9BTT6 524 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 ACSL5Q9ULC5 683 aa25.67■■□□□ 1.7
NME3-209ENST00000566600 RHPN2P1A8MT19 583 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 NDUFS3O75489 264 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 EML2O95834 649 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 FTH1P02794 183 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 OGNP20774 298 aaKnown RBP25.66■■□□□ 1.7
NME3-209ENST00000566600 HALP42357 657 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 FASLGP48023 281 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 FOXC1Q12948 553 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 CBLBQ13191 982 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 SPANXN3Q5MJ09 141 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 METRNLQ641Q3 311 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 ZNF449Q6P9G9 518 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 DHRS13Q6UX07 377 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 SLC9B2Q86UD5 537 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 LRRC6Q86X45 466 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 GALNT15Q8N3T1 639 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 GABPB2Q8TAK5 448 aaPredicted RBP25.66■■□□□ 1.7
NME3-209ENST00000566600 CALML6Q8TD86 181 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 SLC37A2Q8TED4 501 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 CCDC3Q9BQI4 270 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 TRIM56Q9BRZ2 755 aaKnown RBP25.66■■□□□ 1.7
NME3-209ENST00000566600 TSSK1BQ9BXA7 367 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 GRHL1Q9NZI5 618 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 VPS9D1Q9Y2B5 631 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 RNF215Q9Y6U7 377 aa25.66■■□□□ 1.7
NME3-209ENST00000566600 PRMT5O14744 637 aaPredicted RBP25.65■■□□□ 1.7
NME3-209ENST00000566600 OPA1O60313 960 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 OR1I1O60431 355 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 ELK3P41970 407 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 NFE2L1Q14494 772 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 CRYMQ14894 314 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 GLE1Q53GS7 698 aaKnown RBP25.65■■□□□ 1.7
NME3-209ENST00000566600 PERM1Q5SV97 790 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 CENPUQ71F23 418 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 NAT14Q8WUY8 206 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 SH3KBP1Q96B97 665 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 PWWP2AQ96N64 755 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 SARS2Q9NP81 518 aaKnown RBP25.65■■□□□ 1.7
NME3-209ENST00000566600 C20orf96Q9NUD7 363 aaPredicted RBP25.65■■□□□ 1.7
NME3-209ENST00000566600 ZC3H7BQ9UGR2 993 aaKnown RBP25.65■■□□□ 1.7
NME3-209ENST00000566600 TEX264Q9Y6I9 313 aa25.65■■□□□ 1.7
NME3-209ENST00000566600 GOLGA8KD6RF30 607 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 E7ESA3 106 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 GOLGA8TH3BQL2 631 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 BANF1O75531 89 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 XRCC1P18887 633 aaPredicted RBP25.64■■□□□ 1.7
NME3-209ENST00000566600 RPL10P27635 214 aaKnown RBP25.64■■□□□ 1.7
NME3-209ENST00000566600 GPR3P46089 330 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 FOXK2Q01167 660 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 PDIA2Q13087 525 aaKnown RBP25.64■■□□□ 1.7
NME3-209ENST00000566600 SMAD1Q15797 465 aaKnown RBP25.64■■□□□ 1.7
NME3-209ENST00000566600 SEPT7Q16181 437 aaKnown RBP25.64■■□□□ 1.7
NME3-209ENST00000566600 TYSND1Q2T9J0 566 aa25.64■■□□□ 1.7
NME3-209ENST00000566600 ZNF438Q7Z4V0 828 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms