RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF358Q9NW07 568 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SMPD3Q9NY59 655 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 MON2Q7Z3U7 1717 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 AKAP11Q9UKA4 1901 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 A0A075B6Q4 140 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 A0A0A6YYH2 397 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 A6NJ64 397 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 UGT2B11O75310 529 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PIAS1O75925 651 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 THRBP10828 461 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 MTHFD2P13995 350 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 DNAJB1P25685 340 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CD6P30203 668 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 RPS9P46781 194 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 GMFBP60983 142 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PRKCEQ02156 737 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PRKAA1Q13131 559 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC13A2Q13183 592 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KIF19Q2TAC6 998 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TPGS1Q6ZTW0 290 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IKBIPQ70UQ0 350 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CATSPER4Q7RTX7 472 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TAF8Q7Z7C8 310 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 OR8H2Q8N162 312 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GRPEL2Q8TAA5 225 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FAM174AQ8TBP5 190 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 HAVCR2Q8TDQ0 301 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FBLIM1Q8WUP2 373 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC25A36Q96CQ1 311 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CCDC140Q96MF4 163 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SDHCQ99643 169 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 C9orf16Q9BUW7 83 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 LRRC40Q9H9A6 602 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CMTM6Q9NX76 183 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 NKIRAS2Q9NYR9 191 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TRMT112Q9UI30 125 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 PCDHB11Q9Y5F2 797 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 NUP188Q5SRE5 1749 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SSX4O60224 188 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SCO1O75880 301 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CCNE2O96020 404 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 UNGP13051 313 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 CHMP24386 653 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 RFC2P35250 354 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GRIA4P48058 902 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PPP3CCP48454 512 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SERPINB10P48595 397 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ZNF273Q14593 569 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GRTP1Q5TC63 336 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 C16orf62Q7Z3J2 963 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC9B2Q86UD5 537 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CPA5Q8WXQ8 436 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FOXJ1Q92949 421 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CPNE2Q96FN4 548 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 BTF3L4Q96K17 158 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC4A9Q96Q91 983 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 P2RX7Q99572 595 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 AIF1LQ9BQI0 150 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ASPNQ9BXN1 380 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ST6GALNAC4Q9H4F1 302 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SETD4Q9NVD3 440 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 OXSMQ9NWU1 459 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PAQR5Q9NXK6 330 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 HSPBP1Q9NZL4 362 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TLR6Q9Y2C9 796 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 BTBD3Q9Y2F9 522 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ADGRA2Q96PE1 1338 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KIDINS220Q9ULH0 1771 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SGTAO43765 313 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KATNA1O75449 491 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FGF18O76093 207 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FGFR3P22607 806 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CRHBPP24387 322 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KDELR1P24390 212 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PRIM2P49643 509 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SEPHS1P49903 392 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ENPEPQ07075 957 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GNA13Q14344 377 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SUPT20HL1Q3ZLR7 823 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GTDC1Q4AE62 458 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 MROH9Q5TGP6 573 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TIGD3Q6B0B8 471 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FAM124AQ86V42 546 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 OFCC1Q8IZS5 231 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 MCFD2Q8NI22 146 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 APBA2Q99767 749 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TRIM15Q9C019 465 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 NTN4Q9HB63 628 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TBC1D22BQ9NU19 505 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 DIMT1Q9UNQ2 313 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 FIS1Q9Y3D6 152 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PKD1L3Q7Z443 1732 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TTC24A2A3L6 582 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 MEIS3P1A6NDR6 274 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TOR1BO14657 336 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PDPK1O15530 556 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ULK1O75385 1050 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CLIC3O95833 236 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms