RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 NAP1L5Q96NT1 182 aaPredicted RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 TRIB3Q96RU7 358 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 CD180Q99467 661 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 SMAD5Q99717 465 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 SPATA16Q9BXB7 569 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 ARFGAP3Q9NP61 516 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 LATS2Q9NRM7 1088 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 SVILO95425 2214 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 CELSR1Q9NYQ6 3014 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 PDZK1P1A8MUH7 402 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 CPNE3O75131 537 aaKnown RBP12.49□□□□□ -0.41
RNF40-208ENST00000565995 CD48P09326 243 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 PTGIRP43119 386 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 PPP1CAP62136 330 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 TUBB4BP68371 445 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 HSD11B2P80365 405 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 PDE1BQ01064 536 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 TUBB2AQ13885 445 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 KCNAB1Q14722 419 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
RNF40-208ENST00000565995 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 SLC6A19Q695T7 634 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 MED25Q71SY5 747 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 SLC38A9Q8NBW4 561 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 PRR7Q8TB68 274 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
RNF40-208ENST00000565995 HDAC11Q96DB2 347 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 CXorf40BQ96DE9 158 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
RNF40-208ENST00000565995 TUBB2BQ9BVA1 445 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 NUDT9Q9BW91 350 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 SLAMF7Q9NQ25 335 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 KCND1Q9NSA2 647 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 C5AR2Q9P296 337 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 TMPRSS11EQ9UL52 423 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 TACC2O95359 2948 aa12.49□□□□□ -0.41
RNF40-208ENST00000565995 DCHS2Q6V1P9 2916 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 POLQO75417 2590 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 TMEM63AO94886 807 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 CDK14O94921 469 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 CAPN1P07384 714 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 EBLN1P0CF75 366 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 GSDMDP57764 484 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 GPS2Q13227 327 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 DPYSL3Q14195 570 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
RNF40-208ENST00000565995 KHDC1Q4VXA5 237 aaKnown RBP12.48□□□□□ -0.41
RNF40-208ENST00000565995 CRB2Q5IJ48 1285 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 CRTC3Q6UUV7 619 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 DSELQ8IZU8 1212 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 TMEM102Q8N9M5 508 aaPredicted RBP12.48□□□□□ -0.41
RNF40-208ENST00000565995 BRSK1Q8TDC3 778 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 ZFPM2Q8WW38 1151 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 TADA1Q96BN2 335 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 MRFAP1L1Q96HT8 127 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 MAP3K3Q99759 626 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 SLC5A6Q9Y289 635 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 BTRCQ9Y297 605 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 DNAJC16Q9Y2G8 782 aa12.48□□□□□ -0.41
RNF40-208ENST00000565995 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
RNF40-208ENST00000565995 GOLGA6L6A8MZA4 724 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 SCRG1O75711 98 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 MSL3P1P0C860 447 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 BPIP17213 487 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 VCLP18206 1134 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 MX2P20592 715 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 CD86P42081 329 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 VAV2P52735 878 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 DRG2P55039 364 aaKnown RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 TMEM115Q12893 351 aaPredicted RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 SLC10A2Q12908 348 aaPredicted RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 KRT81Q14533 505 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 NR1I3Q14994 352 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 SLC14A2Q15849 920 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 ASIC2Q16515 512 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 RPE65Q16518 533 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 C1QL3Q5VWW1 255 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 E4F1Q66K89 784 aaPredicted RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 IGFL3Q6UXB1 125 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 CERS6Q6ZMG9 384 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms