RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 INPP5DQ92835 1189 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TSACCQ96A04 125 aaPredicted RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 SCARF2Q96GP6 870 aaPredicted RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 LINC00615Q96LM1 132 aaPredicted RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 BIRC8Q96P09 236 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 OR2M4Q96R27 311 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 NDNQ99608 321 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 GPR22Q99680 433 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TIMM29Q9BSF4 260 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 DHRS4Q9BTZ2 278 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 ZDHHC5Q9C0B5 715 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 STMN4Q9H169 189 aaPredicted RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 ARRDC1-AS1Q9H2J1 176 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 CENPHQ9H3R5 247 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 ERVMER34-1Q9H9K5 563 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 SYTL2Q9HCH5 934 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 FGF22Q9HCT0 170 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 SARS2Q9NP81 518 aaKnown RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 MRPL40Q9NQ50 206 aaKnown RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 GPR27Q9NS67 375 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TMEM74BQ9NUR3 256 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TRNAU1APQ9NX07 287 aaKnown RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 DNAJC28Q9NX36 388 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 KLHL42Q9P2K6 505 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TBK1Q9UHD2 729 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 TLK1Q9UKI8 766 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 SLC6A14Q9UN76 642 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 SMG5Q9UPR3 1016 aaKnown RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 MTO1Q9Y2Z2 717 aaKnown RBP7.67□□□□□ -1.18
CDH1-208ENST00000565810 HCN4Q9Y3Q4 1203 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 NFS1Q9Y697 457 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 SLCO1B1Q9Y6L6 691 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 DGKBQ9Y6T7 804 aa7.67□□□□□ -1.18
CDH1-208ENST00000565810 MGAT4DA6NG13 374 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 IQCF5A8MTL0 148 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TRIM49D1C9J1S8 452 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 LIN7AO14910 233 aaPredicted RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 ATP8B1O43520 1251 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 OPA1O60313 960 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 DFNA5O60443 496 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 NIPSNAP2O75323 286 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 CSF2P04141 144 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 MPOP05164 745 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 RETP07949 1114 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ACP5P13686 325 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 FDXRP22570 491 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 DGKAP23743 735 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 MPLP40238 635 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 CTSKP43235 329 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ARRB1P49407 418 aaPredicted RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 RGS4P49798 205 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 SERPINB8P50452 374 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 RAB10P61026 200 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ARHGAP8P85298 464 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ZNF844Q08AG5 666 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ILF3Q12906 894 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDH1-208ENST00000565810 EIF2B5Q13144 721 aaKnown RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 GPS2Q13227 327 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 BMPR2Q13873 1038 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ELOCQ15369 112 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ALG11Q2TAA5 492 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 KIF19Q2TAC6 998 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ZNF542PQ5EBM4 170 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TRIM61Q5EBN2 209 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TPRG1LQ5T0D9 272 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 RBM20Q5T481 1227 aaKnown RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 ZNF549Q6P9A3 640 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 LAYNQ6UX15 382 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TIFABQ6ZNK6 161 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 CHST15Q7LFX5 561 aaPredicted RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 CCDC91Q7Z6B0 441 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 PHACTR4Q8IZ21 702 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 KRT222Q8N1A0 295 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 ZBTB2Q8N680 514 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 OR2L2Q8NH16 312 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 HM13Q8TCT9 377 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TMEM159Q96B96 161 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 FAM136AQ96C01 138 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 PDXPQ96GD0 296 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 CABS1Q96KC9 395 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 TSNARE1Q96NA8 513 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 GPR21Q99679 349 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 GSDMCQ9BYG8 508 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 POPDC3Q9HBV1 291 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 GPAMQ9HCL2 828 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 LATS2Q9NRM7 1088 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 KLC4Q9NSK0 619 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 SPASTQ9UBP0 616 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 APOBEC3BQ9UH17 382 aaKnown RBP7.66□□□□□ -1.18
CDH1-208ENST00000565810 ACSL5Q9ULC5 683 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 DOLKQ9UPQ8 538 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 DNAJC16Q9Y2G8 782 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 DHRS7Q9Y394 339 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
CDH1-208ENST00000565810 A0A087X1B8 175 aa7.65□□□□□ -1.18
CDH1-208ENST00000565810 NEMP2A6NFY4 417 aa7.65□□□□□ -1.18
CDH1-208ENST00000565810 ANKRD36A6QL64 1941 aa7.65□□□□□ -1.18
CDH1-208ENST00000565810 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms