RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ABRAXAS1Q6UWZ7 409 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 KIAA1143Q96AT1 154 aaPredicted RBP18.18■□□□□ 0.5
CLN6-204ENST00000564752 C9orf72Q96LT7 481 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 CATSPER2Q96P56 530 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 VPS35Q96QK1 796 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 EFHD1Q9BUP0 239 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 TRIM4Q9C037 500 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 HACD3Q9P035 362 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
CLN6-204ENST00000564752 DNAJC16Q9Y2G8 782 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 GOLGA6L9A6NEM1 432 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 PDZK1P1A8MUH7 402 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
CLN6-204ENST00000564752 KCNN4O15554 427 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 ANXA9O76027 345 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 BRAFP15056 766 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 TYRP1P17643 537 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 HMGCLP35914 325 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 CCR10P46092 362 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 GSDMDP57764 484 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 ATP13A5Q4VNC0 1218 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 WASH2PQ6VEQ5 465 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 GLT6D1Q7Z4J2 308 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 TRIM48Q8IWZ4 208 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 UNC5BQ8IZJ1 945 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 WASH6PQ9NQA3 447 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 TUBD1Q9UJT1 453 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 CAPN6Q9Y6Q1 641 aa18.17■□□□□ 0.5
CLN6-204ENST00000564752 HECTD1Q9ULT8 2610 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 ZNF189O75820 626 aaPredicted RBP18.16■□□□□ 0.5
CLN6-204ENST00000564752 AMD1P17707 334 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 IDSP22304 550 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
CLN6-204ENST00000564752 TMEM115Q12893 351 aaPredicted RBP18.16■□□□□ 0.5
CLN6-204ENST00000564752 KCNAB2Q13303 367 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 MAP7Q14244 749 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 PRPSAP1Q14558 356 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 SEPT7Q16181 437 aaKnown RBP18.16■□□□□ 0.5
CLN6-204ENST00000564752 ANKRD20A2Q5SQ80 823 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 ANKRD20A1Q5TYW2 823 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 AGAP9Q5VTM2 703 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 ANKRD20A3Q5VUR7 823 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 ZDHHC20Q5W0Z9 365 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 C11orf96Q7Z7L8 435 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 TTC30BQ8N4P2 665 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 DTX3LQ8TDB6 740 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 TGM7Q96PF1 710 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 FICDQ9BVA6 458 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 SLC40A1Q9NP59 571 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 IL26Q9NPH9 171 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 POT1Q9NUX5 634 aa18.16■□□□□ 0.5
CLN6-204ENST00000564752 PSMB4P28070 264 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 SPAM1P38567 509 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
CLN6-204ENST00000564752 FOXM1Q08050 763 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 RBM12BQ8IXT5 1001 aaKnown RBP18.15■□□□□ 0.5
CLN6-204ENST00000564752 ESX1Q8N693 406 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 TTC13Q8NBP0 860 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 BRSK1Q8TDC3 778 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 SPATA13Q96N96 652 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 GORASP1Q9BQQ3 440 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 TSGA10Q9BZW7 698 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 ZNF768Q9H5H4 540 aaKnown RBP18.15■□□□□ 0.5
CLN6-204ENST00000564752 AAR2Q9Y312 384 aaKnown RBP18.15■□□□□ 0.5
CLN6-204ENST00000564752 PKP3Q9Y446 797 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 ZNF106Q9H2Y7 1883 aaKnown RBP18.15■□□□□ 0.5
CLN6-204ENST00000564752 NAV2Q8IVL1 2488 aa18.15■□□□□ 0.5
CLN6-204ENST00000564752 UBR5O95071 2799 aaPredicted RBP18.14■□□□□ 0.5
CLN6-204ENST00000564752 OR52A4PA6NMU1 304 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 DDX3YO15523 660 aaKnown RBP18.14■□□□□ 0.49
CLN6-204ENST00000564752 KCNJ13O60928 360 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 PRKAR1AP10644 381 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 STAT5AP42229 794 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 LEPRP48357 1165 aaKnown RBP18.14■□□□□ 0.49
CLN6-204ENST00000564752 SEPHS1P49903 392 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 CDC20Q12834 499 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 RNF10Q8N5U6 811 aaKnown RBP18.14■□□□□ 0.49
CLN6-204ENST00000564752 GDAP1Q8TB36 358 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 CCDC110Q8TBZ0 833 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 PPP1R2P1Q96PQ5 205 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 IL17CQ9P0M4 197 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 EPHA6Q9UF33 1036 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 WDR37Q9Y2I8 494 aa18.14■□□□□ 0.49
CLN6-204ENST00000564752 BUD23O43709 281 aaKnown RBP18.13■□□□□ 0.49
CLN6-204ENST00000564752 KRT86O43790 486 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
CLN6-204ENST00000564752 AGTP01019 485 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 VCLP18206 1134 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 CAPZBP47756 277 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 SH3BP2P78314 561 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 MC1RQ01726 317 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 GTF2H3Q13889 308 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 GPR18Q14330 331 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 IL11RAQ14626 422 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 CRTC2Q53ET0 693 aaPredicted RBP18.13■□□□□ 0.49
CLN6-204ENST00000564752 FAM151BQ6UXP7 276 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 PTRH1Q86Y79 214 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms