RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 LOXL2Q9Y4K0 774 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 A6NCN8 305 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 MGAT4DA6NG13 374 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 F8W8V4 182 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 H7C0S8 307 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 DXOO77932 396 aaKnown RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 KRT14P02533 472 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 ATP1B2P14415 290 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 ACRV1P26436 265 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 CSTF2P33240 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 VPS41P49754 854 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PDX1P52945 283 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TERF1P54274 439 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 EPHA4P54764 986 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 SESN2P58004 480 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PRAMEP78395 509 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TRA2AQ13595 282 aaKnown RBP eCLIP13.42□□□□□ -0.263e-8■□□□□ 10.8
CNOT1-206ENST00000564557 KRT33BQ14525 404 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TRIP13Q15645 432 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 SNAP47Q5SQN1 464 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TMEM164Q5U3C3 297 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TMEM71Q6P5X7 295 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 C11orf96Q7Z7L8 435 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 SERPINA9Q86WD7 417 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 RBM12BQ8IXT5 1001 aaKnown RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PRELID2Q8N945 189 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF248Q8NDW4 579 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 OR4D9Q8NGE8 314 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 OR6P1Q8NGX9 317 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 GRK7Q8WTQ7 553 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC97Q96F63 343 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 SLC46A1Q96NT5 459 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 SEMA6CQ9H3T2 930 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 CASS4Q9NQ75 786 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 POT1Q9NUX5 634 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PISDQ9UG56 409 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 ACSL5Q9ULC5 683 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 TTC7AQ9ULT0 858 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 PSMD13Q9UNM6 376 aa13.42□□□□□ -0.26
CNOT1-206ENST00000564557 URB1O60287 2271 aaKnown RBP13.42□□□□□ -0.26
CNOT1-206ENST00000564557 MROH6A6NGR9 719 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 AGAP14A8MT82 685 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 QSOX1O00391 747 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 ITGA2BP08514 1039 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 TCP1P17987 556 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 MPSTP25325 297 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CA5AP35218 305 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 EIF2S3P41091 472 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SLC19A1P41440 591 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 GRIA1P42261 906 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 NPY2RP49146 381 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 LIMK2P53671 638 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 MAPK10P53779 464 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 GNG11P61952 73 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CDK16Q00536 496 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 DMPKQ09013 629 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 GPS1Q13098 491 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SQSTM1Q13501 440 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 NFE2L1Q14494 772 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 BCL7AQ4VC05 210 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 FASTKD1Q53R41 847 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 TSTD2Q5T7W7 516 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC137Q6PK04 289 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 TMEM26Q6ZUK4 368 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 PLXDC1Q8IUK5 500 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SLITRK4Q8IW52 837 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CFAP206Q8IYR0 622 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 OR2L2Q8NH16 312 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SNIP1Q8TAD8 396 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 ACTRT1Q8TDG2 376 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC74BQ96LY2 380 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 UCK1Q9HA47 277 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SMARCAL1Q9NZC9 954 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SCHIP1Q9P0W5 487 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF624Q9P2J8 865 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-206ENST00000564557 SNX12Q9UMY4 172 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 ACACAQ13085 2346 aa13.41□□□□□ -0.26
CNOT1-206ENST00000564557 IGHV5-10-1A0A0J9YXX1 117 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 LILRA5A6NI73 299 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 OR52A4PA6NMU1 304 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 CES2O00748 559 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
CNOT1-206ENST00000564557 TLX3O43711 291 aaPredicted RBP13.4□□□□□ -0.26
CNOT1-206ENST00000564557 KRT37O76014 449 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 POLBP06746 335 aa13.4□□□□□ -0.26
CNOT1-206ENST00000564557 SLC35G4P0C7Q5 338 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms