RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CARNMT1Q8N4J0 409 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ZUFSPQ96AP4 578 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 KLRG1Q96E93 195 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 AP3M1Q9Y2T2 418 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 FAM72CH0Y354 149 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PLOD3O60568 738 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 IFNA14P01570 189 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PKMP14618 531 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 TTPAP49638 278 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 AIF1P55008 147 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ZSWIM7Q19AV6 140 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF284Q2VY69 593 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 INTS6LQ5JSJ4 861 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 C6orf141Q5SZD1 244 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 FAM72AQ5TYM5 149 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 FAM72DQ6L9T8 149 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 FAM72BQ86X60 149 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ANKFN1Q8N957 763 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 GPR152Q8TDT2 470 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 NACC2Q96BF6 587 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 CLEC4MQ9H2X3 399 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ASB8Q9H765 288 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SP140LQ9H930 580 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF490Q9ULM2 529 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 CARD8Q9Y2G2 431 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 DAOAP59103 153 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 LILRA4P59901 499 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SPIBQ01892 262 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 IRF8Q02556 426 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 STEAP4Q687X5 459 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ADAMTSL2Q86TH1 951 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SLC13A3Q8WWT9 602 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PRDM5Q9NQX1 630 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SMPD4Q9NXE4 827 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 MRPS7Q9Y2R9 242 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 NUP98P52948 1817 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 A8MU76 341 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 H0YJX3 145 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 NME4O00746 187 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 NBNO60934 754 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SNX4O95219 450 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PGK1P00558 417 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PRKCGP05129 697 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 IFI30P13284 250 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 MYL12AP19105 171 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 MC4RP32245 332 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 THPOP40225 353 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 KRT33BQ14525 404 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 CPNE9Q8IYJ1 553 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 CNIH3Q8TBE1 160 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 TFAP2CQ92754 450 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 GMIPQ9P107 970 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 GMPR2Q9P2T1 348 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 MOSPD1Q9UJG1 213 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 SAMD4AQ9UPU9 718 aaKnown RBP12.47□□□□□ -0.41
COMMD4-209ENST00000564068 PCDHB3Q9Y5E6 796 aa12.47□□□□□ -0.41
COMMD4-209ENST00000564068 ZW10O43264 779 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 RASAL1O95294 804 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CYP11A1P05108 521 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 IL4RP24394 825 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 NUDT6P53370 316 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TUBA3CQ13748 450 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 SULT1C3Q6IMI6 304 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 AFTPHQ6ULP2 937 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 C16orf59Q7L2K0 433 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CHERPQ8IWX8 916 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CFAP52Q8N1V2 620 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 OR13C4Q8NGS5 318 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 PHF10Q8WUB8 498 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 GFM1Q96RP9 751 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 LHPPQ9H008 270 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 SLC25A51Q9H1U9 297 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 NANOGQ9H9S0 305 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 LRTM1Q9HBL6 345 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CLN6Q9NWW5 311 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 KCTD3Q9Y597 815 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms