RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 POPDC3Q9HBV1 291 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 SNX15Q9NRS6 342 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 ATXN10Q9UBB4 475 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
SPG7-209ENST00000564047 CA5BQ9Y2D0 317 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 MED16Q9Y2X0 877 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 FASNP49327 2511 aaKnown RBP12.73□□□□□ -0.37
SPG7-209ENST00000564047 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 LRRK1Q38SD2 2015 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 A0A1W2PPM1 405 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 E5RI56 91 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 H0Y8X5 98 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TPP1O14773 563 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 ZZEF1O43149 2961 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 NUAK1O60285 661 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 NIPSNAP2O75323 286 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 ASMTLO95671 621 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 FTH1P02794 183 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 MPOP05164 745 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 ZNF8P17098 575 aaPredicted RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 CHRM3P20309 590 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 SAT1P21673 171 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 HTR1BP28222 390 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CRABP2P29373 138 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TYK2P29597 1187 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 MDH1P40925 334 aaKnown RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 SKIV2L2P42285 1042 aaKnown RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 PRLHRP49683 370 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CSRP3P50461 194 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CDKN2DP55273 166 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 RAB10P61026 200 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 PPP2R2AP63151 447 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TIAL1Q01085 375 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPG7-209ENST00000564047 NFATC4Q14934 902 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 BCL7AQ4VC05 210 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 UGT3A1Q6NUS8 523 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TMEFF1Q8IYR6 380 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 SLC6A18Q96N87 628 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 OLFM1Q99784 485 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 OR2AG1Q9H205 316 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 RMI1Q9H9A7 625 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 LATS2Q9NRM7 1088 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 ZSCAN32Q9NX65 697 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TAS2R13Q9NYV9 303 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 KLHL42Q9P2K6 505 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 EIF2B4Q9UI10 523 aaKnown RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 GMEB2Q9UKD1 530 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
SPG7-209ENST00000564047 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 SLC17A4Q9Y2C5 497 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
SPG7-209ENST00000564047 TRPM6Q9BX84 2022 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 PLXND1Q9Y4D7 1925 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 IQCF5A8MTL0 148 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 CHUKO15111 745 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 HRO43593 1189 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 MAGEC1O60732 1142 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 C2P06681 752 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 CEACAM5P06731 702 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 GSTM1P09488 218 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 LSP1P33241 339 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 CCNFP41002 786 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 CTSCP53634 463 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 GSTM4Q03013 218 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 OVGP1Q12889 678 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 COL9A2Q14055 689 aaPredicted RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 PTK2BQ14289 1009 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 PMS2CLQ68D20 193 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 DOK6Q6PKX4 331 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 TMEM220Q6QAJ8 160 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 Q6ZSR6 202 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 SH2D5Q6ZV89 423 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 RAPH1Q70E73 1250 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 CMC1Q7Z7K0 106 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 IQCHQ86VS3 1027 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 DCP2Q8IU60 420 aaKnown RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 MFSD2AQ8NA29 543 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 SCARF2Q96GP6 870 aaPredicted RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 LINC00615Q96LM1 132 aaPredicted RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 WDR92Q96MX6 357 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 SYTL2Q9HCH5 934 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 AASDHPPTQ9NRN7 309 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 GPR27Q9NS67 375 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms