RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RFX8Q6ZV50 586 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 ALS2CR12Q96Q35 445 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 HERPUD2Q9BSE4 406 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 LATS2Q9NRM7 1088 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 KCNK6Q9Y257 313 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 KIR2DS5A0A0G2JLQ3 304 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 A0A0G2JNG1 304 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 KIR2DS3K7RE56 304 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 ASMTLO95671 621 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 F3P13726 295 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 SLC2A4P14672 509 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 AMD1P17707 334 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 KDELR1P24390 212 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 PAPOLAP51003 745 aaKnown RBP15.63■□□□□ 0.09
RNF40-205ENST00000563909 SCNN1BP51168 640 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 DPTQ07507 201 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 NSUN2Q08J23 767 aaKnown RBP eCLIP15.63■□□□□ 0.09
RNF40-205ENST00000563909 ART3Q13508 389 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 KIR2DS5Q14953 304 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 KYNUQ16719 465 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 TMCO4Q5TGY1 634 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 VWA5B1Q5TIE3 1220 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 MED25Q71SY5 747 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 PEX26Q7Z412 305 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 VSIG1Q86XK7 387 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 TMEM102Q8N9M5 508 aaPredicted RBP15.63■□□□□ 0.09
RNF40-205ENST00000563909 KLHL6Q8WZ60 621 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 INPP5DQ92835 1189 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 MR1Q95460 341 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 NSMCE3Q96MG7 304 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 ZNF670Q9BS34 389 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 CINPQ9BW66 212 aaPredicted RBP15.63■□□□□ 0.09
RNF40-205ENST00000563909 SLC39A8Q9C0K1 460 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 CD84Q9UIB8 345 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 RARRES3Q9UL19 164 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 PCYT1BQ9Y5K3 369 aaPredicted RBP15.63■□□□□ 0.09
RNF40-205ENST00000563909 SLC30A1Q9Y6M5 507 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 CAPN6Q9Y6Q1 641 aa15.63■□□□□ 0.09
RNF40-205ENST00000563909 CCDC66A2RUB6 948 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 LRRD1A4D1F6 860 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 SOD1P00441 154 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 KRT1P04264 644 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 HOXB4P17483 251 aaPredicted RBP15.62■□□□□ 0.09
RNF40-205ENST00000563909 ERCC2P18074 760 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 NELFEP18615 380 aaKnown RBP15.62■□□□□ 0.09
RNF40-205ENST00000563909 LHCGRP22888 699 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 CTNNA2P26232 953 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 CTNNA1P35221 906 aaKnown RBP15.62■□□□□ 0.09
RNF40-205ENST00000563909 RRADP55042 308 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 TUBB3Q13509 450 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 DPYSQ14117 519 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 DPYSL3Q14195 570 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 FAM69BQ5VUD6 431 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 ZNF517Q6ZMY9 492 aaPredicted RBP15.62■□□□□ 0.09
RNF40-205ENST00000563909 RFLNAQ6ZTI6 216 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 FAM92BQ6ZTR7 304 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 PRSS42Q7Z5A4 293 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 NT5DC3Q86UY8 548 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 FJX1Q86VR8 437 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 KCNMB4Q86W47 210 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 KATNAL2Q8IYT4 538 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 AVL9Q8NBF6 648 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 RAPGEF5Q92565 580 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 AP2M1Q96CW1 435 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 FCRL4Q96PJ5 515 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 CSPG4P5Q96PW8 444 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 SNX7Q9UNH6 387 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 PCDHA3Q9Y5H8 950 aa15.62■□□□□ 0.09
RNF40-205ENST00000563909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF40-205ENST00000563909 PCSK5Q92824 1860 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 MAP1AP78559 2803 aaPredicted RBP15.61■□□□□ 0.09
RNF40-205ENST00000563909 GOLGA6L9A6NEM1 432 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 OR5K4A6NMS3 321 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 MIF4GDA9UHW6 222 aaKnown RBP15.61■□□□□ 0.09
RNF40-205ENST00000563909 ZNF487B1APH4 448 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 ZRANB2O95218 330 aaKnown RBP eCLIP15.61■□□□□ 0.09
RNF40-205ENST00000563909 CD48P09326 243 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 ACP5P13686 325 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 COX6B1P14854 86 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 FOLR1P15328 257 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 AMPD1P23109 780 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 IL4RP24394 825 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 UBE2IP63279 158 aaKnown RBP15.61■□□□□ 0.09
RNF40-205ENST00000563909 KCNAB1Q14722 419 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 PTPRRQ15256 657 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 IZUMO3Q5VZ72 239 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 TMEM26Q6ZUK4 368 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 TECPR1Q7Z6L1 1165 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 REXO1L1PQ8IX06 675 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 RCOR2Q8IZ40 523 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 MMP21Q8N119 569 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 UBL4BQ8N7F7 174 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 TRIM58Q8NG06 486 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 RBM41Q96IZ5 413 aaKnown RBP15.61■□□□□ 0.09
RNF40-205ENST00000563909 PLEKHG4BQ96PX9 1271 aa15.61■□□□□ 0.09
RNF40-205ENST00000563909 MAK16Q9BXY0 300 aaKnown RBP15.61■□□□□ 0.09
RNF40-205ENST00000563909 UCK1Q9HA47 277 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms