RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ERCC2P18074 760 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 FCGRTP55899 365 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 FCHO2Q0JRZ9 810 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 NKG7Q16617 165 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 PLA2G4EQ3MJ16 856 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 NAPEPLDQ6IQ20 393 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 TMEM179BQ7Z7N9 219 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 NUDT8Q8WV74 236 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 RDH12Q96NR8 316 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 MKRN2Q9H000 416 aaKnown RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 RANGRFQ9HD47 186 aaPredicted RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 C12orf4Q9NQ89 552 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 RASSF1Q9NS23 344 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 MAT2BQ9NZL9 334 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 DNAJB9Q9UBS3 223 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 KCNN3Q9UGI6 736 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 GTF2IRD1Q9UHL9 959 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 MAGEL2Q9UJ55 1249 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 DNMT3LQ9UJW3 386 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 CYP11A1P05108 521 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 SLC35A2P78381 396 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 POU4F1Q01851 419 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 ZNF45Q02386 682 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 LAIR1Q6GTX8 287 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 ERAP2Q6P179 960 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 ZNF517Q6ZMY9 492 aaPredicted RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 ESX1Q8N693 406 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 CHAC2Q8WUX2 184 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 SNAPC3Q92966 411 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 RMDN1Q96DB5 314 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 BBS2Q9BXC9 721 aa12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 UBA2Q9UBT2 640 aaPredicted RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 MAFBQ9Y5Q3 323 aaPredicted RBP12.22□□□□□ -0.45
SCAMP2-204ENST00000563829 SHROOM3Q8TF72 1996 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 A0A1B0GTL3 188 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 GSTA4O15217 222 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 RGS10O43665 173 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 GAS2O43903 313 aaKnown RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 FAM20BO75063 409 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 CYP7B1O75881 506 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 TSPAN9O75954 239 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 RECQL5O94762 991 aaPredicted RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 DNAJB1P25685 340 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 LRRC26Q2I0M4 334 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 SPANXN2Q5MJ10 180 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 TWF2Q6IBS0 349 aaKnown RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 AHSA2Q719I0 299 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 LDB1Q86U70 411 aaPredicted RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 FAM109AQ8N4B1 249 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 AMER2Q8N7J2 671 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 OR10Q1Q8NGQ4 319 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 MRPL45Q9BRJ2 306 aaKnown RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 TRMOQ9BU70 441 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 CDT1Q9H211 546 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 NARFLQ9H6Q4 476 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 USE1Q9NZ43 259 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 MGAMO43451 1857 aa12.21□□□□□ -0.45
SCAMP2-204ENST00000563829 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 PFKLP17858 780 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 LIPAP38571 399 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 GALNT1Q10472 559 aaPredicted RBP12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 SLAMF1Q13291 335 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 RCAN2Q14206 197 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 DUSP7Q16829 419 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 PFKFB4Q16877 469 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 PCID2Q5JVF3 399 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 ZNF484Q5JVG2 852 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 STRIP1Q5VSL9 837 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 GLRX5Q86SX6 157 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 HORMAD1Q86X24 394 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 PJA1Q8NG27 643 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 REXO5Q96IC2 774 aaKnown RBP12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 NECTIN4Q96NY8 510 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 GPR45Q9Y5Y3 372 aa12.21□□□□□ -0.46
SCAMP2-204ENST00000563829 SLC22A3O75751 556 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 GADD45AP24522 165 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 TGFBR2P37173 567 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 GRIK1P39086 918 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 SLC15A1P46059 708 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 CD83Q01151 205 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 PXDC1Q5TGL8 231 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 EID3Q8N140 333 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 TCAIMQ8N3R3 496 aa12.2□□□□□ -0.46
SCAMP2-204ENST00000563829 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms