RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PIF1Q9H611 641 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 TMEM260Q9NX78 707 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 GINS2Q9Y248 185 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 KCNIP3Q9Y2W7 256 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SLC9A3R1O14745 358 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 AZIN1O14977 448 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SAGP10523 405 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 CERS1P27544 350 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CLCN5P51795 746 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 POLR2JP52435 117 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 HUNKP57058 714 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 GK2Q14410 553 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 ZNF169Q14929 603 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 MAP1SQ66K74 1059 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 AADACL2Q6P093 401 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PAMR1Q6UXH9 720 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CMTR2Q8IYT2 770 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 GJD3Q8N144 294 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 RFKQ969G6 155 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 TPD52L3Q96J77 140 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 FBXO8Q9NRD0 319 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 FAM208AQ9UK61 1670 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 ARHGAP23Q9P227 1491 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 IFNA10P01566 189 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 MTHFD1P11586 935 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 HGFP14210 728 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SULT1E1P49888 294 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 ERVK-21P61565 698 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 MC2RQ01718 297 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PTSQ03393 145 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 DUSP6Q16828 381 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 AVPI1Q5T686 147 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 OLFML2AQ68BL7 652 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 MOB2Q70IA6 237 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 ZSCAN1Q8NBB4 408 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CANT1Q8WVQ1 401 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 C3orf49Q96BT1 292 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 C1GALT1C1Q96EU7 318 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 ITCHQ96J02 903 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CNPPD1Q9BV87 410 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 LHPPQ9H008 270 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 QRSL1Q9H0R6 528 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 CATSPERBQ9H7T0 1116 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SMOXQ9NWM0 555 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 TMEM181Q9P2C4 612 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 TBX20Q9UMR3 447 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 MGAT4BQ9UQ53 548 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PCDHGB2Q9Y5G2 931 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PRKYO43930 277 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CALCAP01258 141 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SLC26A2P50443 739 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 RNF212Q495C1 297 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 IQCCQ4KMZ1 466 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 IGSF11Q5DX21 431 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 SLC35F1Q5T1Q4 408 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 ADNP2Q6IQ32 1131 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 UNC5AQ6ZN44 842 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 COLGALT1Q8NBJ5 622 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 FAM129BQ96TA1 746 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 RHOJQ9H4E5 214 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 EIF2B3Q9NR50 452 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 HCN2Q9UL51 889 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 U3KQV3 271 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CNTNAP1P78357 1384 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CAPN14A8MX76 684 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PRSS48Q7RTY5 328 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 DPPA2Q7Z7J5 298 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 BEST4Q8NFU0 473 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 COQ8AQ8NI60 647 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 NFKBIZQ9BYH8 718 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 NDRG3Q9UGV2 375 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PRAF2O60831 178 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 RLN1P04808 185 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 S100A3P33764 101 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 CHAF1BQ13112 559 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 C6orf141Q5SZD1 244 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 IDNKQ5T6J7 187 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 FBXL19Q6PCT2 694 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 TIFABQ6ZNK6 161 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 KCTD1Q719H9 257 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 NATD1Q8N6N6 113 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 ZNF670Q9BS34 389 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 DPCDQ9BVM2 203 aaPredicted RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 ATXN3LQ9H3M9 355 aa6.2□□□□□ -1.42
CLK3-212ENST00000563418 PPIEQ9UNP9 301 aaKnown RBP6.2□□□□□ -1.42
CLK3-212ENST00000563418 F5H423 210 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 SLC22A5O76082 557 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 EPCAMP16422 314 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MGAT1P26572 445 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PTGR1Q14914 329 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PXDC1Q5TGL8 231 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MBLAC2Q68D91 279 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZC3HC1Q86WB0 502 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 MARCH10Q8NA82 808 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 OR4C6Q8NH72 309 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CEP76Q8TAP6 659 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms