RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RALBP11234 206 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 F3P13726 295 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 MAGEA6P43360 314 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 FASLGP48023 281 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 GPS1Q13098 491 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 CLN3Q13286 438 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 BIRC2Q13490 618 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 SPIDRQ14159 915 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 TRIP13Q15645 432 aaPredicted RBP16.29■□□□□ 0.2
CDT1-202ENST00000562747 PLA2G4EQ3MJ16 856 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 IYDQ6PHW0 289 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 TMEM220Q6QAJ8 160 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 C11orf96Q7Z7L8 435 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 CLEC14AQ86T13 490 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 CCNJLQ8IV13 435 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 NXPE1Q8N323 547 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 SFRP1Q8N474 314 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 PATE1Q8WXA2 126 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 LRRN3Q9H3W5 708 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 SLC23A2Q9UGH3 650 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 NEU2Q9Y3R4 380 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 TCAF1Q9Y4C2 921 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 KIR2DS5A0A0G2JLQ3 304 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 A0A0G2JNG1 304 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CFAP99D6REC4 459 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 KIR2DS3K7RE56 304 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CCL22O00626 93 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 EML2O95834 649 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 GPR3P46089 330 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 NPY2RP49146 381 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 VPS41P49754 854 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CTSCP53634 463 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CCL7P80098 99 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
CDT1-202ENST00000562747 ACVR1Q04771 509 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CACNG1Q06432 222 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 DMPKQ09013 629 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 KCNJ11Q14654 390 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 KIR2DS5Q14953 304 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 CCDC38Q502W7 563 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 ZRANB3Q5FWF4 1079 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 PCID2Q5JVF3 399 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 TSTD2Q5T7W7 516 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 LRRC8BQ6P9F7 803 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 AVL9Q8NBF6 648 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 PPHLN1Q8NEY8 458 aaKnown RBP16.28■□□□□ 0.2
CDT1-202ENST00000562747 SLC37A2Q8TED4 501 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 DCUN1D1Q96GG9 259 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 GFM1Q96RP9 751 aaKnown RBP16.28■□□□□ 0.2
CDT1-202ENST00000562747 COPS8Q99627 209 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 IL22Q9GZX6 179 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 OSGEPL1Q9H4B0 414 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 STN1Q9H668 368 aaKnown RBP16.28■□□□□ 0.2
CDT1-202ENST00000562747 SARS2Q9NP81 518 aaKnown RBP16.28■□□□□ 0.2
CDT1-202ENST00000562747 BFARQ9NZS9 450 aa16.28■□□□□ 0.2
CDT1-202ENST00000562747 IGLV3-16A0A075B6K0 115 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 A0A1W2PQM1 296 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 OR2AG2A6NM03 316 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 PPM1DO15297 605 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 SNX2O60749 519 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 TNFSF15O95150 251 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 RPLP0P05388 317 aaKnown RBP16.27■□□□□ 0.2
CDT1-202ENST00000562747 IDSP22304 550 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 ACRV1P26436 265 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 ARSDP51689 593 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 B4GALNT1Q00973 533 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 BCL7AQ4VC05 210 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 WASH2PQ6VEQ5 465 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 B3GNT8Q7Z7M8 397 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 SLC9B2Q86UD5 537 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 AMZ2Q86W34 360 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 CREG2Q8IUH2 290 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 Q8N9G6 341 aaPredicted RBP16.27■□□□□ 0.2
CDT1-202ENST00000562747 OR13J1Q8NGT2 312 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 WDR36Q8NI36 951 aaKnown RBP16.27■□□□□ 0.2
CDT1-202ENST00000562747 MED8Q96G25 268 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 FAM96AQ9H5X1 160 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 SYNDIG1Q9H7V2 258 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 WASH6PQ9NQA3 447 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 PRDM8Q9NQV8 689 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 ZDHHC3Q9NYG2 299 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 RNF14Q9UBS8 474 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 DNAJC16Q9Y2G8 782 aa16.27■□□□□ 0.2
CDT1-202ENST00000562747 HECTD1Q9ULT8 2610 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 CCDC187A0A096LP49 1063 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 TCRBV7S3A2A0A539 114 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 CCDC78A2IDD5 438 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 D6RAR5 112 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 EFSO43281 561 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 POP7O75817 140 aaKnown RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 ATP1B2P14415 290 aaPredicted RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 CDKN1CP49918 316 aaPredicted RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 SESN2P58004 480 aaPredicted RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 HHEXQ03014 270 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 CLPPQ16740 277 aaPredicted RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 FNBP1LQ5T0N5 605 aa16.26■□□□□ 0.19
CDT1-202ENST00000562747 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.26■□□□□ 0.19
CDT1-202ENST00000562747 AGAP9Q5VTM2 703 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms