RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 AKAP7Q9P0M2 348 aaPredicted RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 KIF17Q9P2E2 1029 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 GPSM3Q9Y4H4 160 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 PDE4DIPQ5VU43 2346 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 CCDC154A6NI56 674 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 F8W810 466 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 INPP4BO15327 924 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 CNOT3O75175 753 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 IVDP26440 423 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 PPP2R1BP30154 601 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 ATXN3P54252 364 aaPredicted RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 CHRNB3Q05901 458 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 SLC10A2Q12908 348 aaPredicted RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 PHKG1Q16816 387 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 FBXO43Q4G163 708 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 TMEM132CQ8N3T6 1108 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 DLG3Q92796 817 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 GLMNQ92990 594 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 ISG20Q96AZ6 181 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 FAM120BQ96EK7 910 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 SIPA1Q96FS4 1042 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 SELENONQ9NZV5 590 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 HEPACAM2A8MVW5 462 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 SLC22A2O15244 555 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 PRKACAP17612 351 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 PPIBP23284 216 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 DHCR24Q15392 516 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 ZNF805Q5CZA5 627 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 ARSIQ5FYB1 569 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 ZCCHC8Q6NZY4 707 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 LYSMD3Q7Z3D4 306 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 SYT12Q8IV01 421 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 DENND6AQ8IWF6 608 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 HDDC3Q8N4P3 179 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 C2CD4AQ8NCU7 369 aaPredicted RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 ANKRD49Q8WVL7 239 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 KCNJ9Q92806 393 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 AIF1LQ9BQI0 150 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 MGME1Q9BQP7 344 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 CENPOQ9BU64 300 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 TDRD1Q9BXT4 1180 aaKnown RBP7.47□□□□□ -1.21
TCF4-216ENST00000562680 SYNDIG1Q9H7V2 258 aa7.47□□□□□ -1.21
TCF4-216ENST00000562680 DCXO43602 365 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 WDR47O94967 919 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 ME2P23368 584 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 CTGFP29279 349 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 HOXC13P31276 330 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 GRIA1P42261 906 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 CSNK1DP48730 415 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 QPCTQ16769 361 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 CYP51A1Q16850 503 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 C6orf183Q5T699 404 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 LAYNQ6UX15 382 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 KIF2BQ8N4N8 673 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 TTC9BQ8N6N2 239 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 ARFGAP1Q8N6T3 406 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 OR13C4Q8NGS5 318 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 ING2Q9H160 280 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 TRIT1Q9H3H1 467 aaKnown RBP7.46□□□□□ -1.21
TCF4-216ENST00000562680 CORO2BQ9UQ03 480 aa7.46□□□□□ -1.21
TCF4-216ENST00000562680 UNC5CO95185 931 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 SNRPB2P08579 225 aaKnown RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 RAB15P59190 212 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 COX10Q12887 443 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 ABRQ12979 859 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 CNSTQ6PJW8 725 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 TRIB3Q96RU7 358 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 P2RY13Q9BPV8 354 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 MYLK2Q9H1R3 596 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 ADAM7Q9H2U9 754 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 ANLNQ9NQW6 1124 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 MFHAS1Q9Y4C4 1052 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 SIPA1L1O43166 1804 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 LCHNA4D1U4 455 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 NPEPPSL1A6NEC2 478 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 BHMG1C9JSJ3 638 aaPredicted RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 TAF4O00268 1085 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 TNFRSF10BO14763 440 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 FANCGO15287 622 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 AKAP10O43572 662 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 PI15O43692 258 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 FAM155BO75949 473 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 EEF1B2P24534 225 aaKnown RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 TLX1P31314 330 aaPredicted RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 RPIAP49247 311 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 HNMTP50135 292 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 SP140Q13342 867 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 MYBPC3Q14896 1274 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 FSTL5Q8N475 847 aaPredicted RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 VPS50Q96JG6 964 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 MRGPRX2Q96LB1 330 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 GATA5Q9BWX5 397 aaPredicted RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 CWH43Q9H720 699 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 MTMR10Q9NXD2 777 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 RAB23Q9ULC3 237 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 PRPF19Q9UMS4 504 aaKnown RBP7.46□□□□□ -1.22
TCF4-216ENST00000562680 ARL5AQ9Y689 179 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 A0A0D9SEW6 157 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms