RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TMPRSS15P98073 1019 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 GPR18Q14330 331 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 CLCA4Q14CN2 919 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 AGAP9Q5VTM2 703 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 TMEM220Q6QAJ8 160 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 ABRAXAS1Q6UWZ7 409 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 ARHGAP22Q7Z5H3 698 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 AMZ2Q86W34 360 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 TAB3Q8N5C8 712 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 BEND7Q8N7W2 519 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 ZNF398Q8TD17 642 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 RSC1A1Q92681 617 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 CXorf40BQ96DE9 158 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 DDA1Q9BW61 102 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 B3GNT4Q9C0J1 378 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 EPB41L1Q9H4G0 881 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 UCK1Q9HA47 277 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 FAM8A1Q9UBU6 413 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 PSMD13Q9UNM6 376 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 PCDHB11Q9Y5F2 797 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 TK2O00142 265 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 POP7O75817 140 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 SRP72O76094 671 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 UBXN7O94888 489 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 WT1P19544 449 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 MSH3P20585 1137 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 DMPKQ09013 629 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 MSLNQ13421 630 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 NFE2L1Q14494 772 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 FNBP1LQ5T0N5 605 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 DENND5AQ6IQ26 1287 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 WASH2PQ6VEQ5 465 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 TTC13Q8NBP0 860 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 LSM14AQ8ND56 463 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 ATG4AQ8WYN0 398 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 HES6Q96HZ4 224 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 PPP1R2P1Q96PQ5 205 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 CTRCQ99895 268 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 ASB8Q9H765 288 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 WASH6PQ9NQA3 447 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 PCDHGA4Q9Y5G9 962 aa16.88■□□□□ 0.29
CDC42BPB-208ENST00000561271 CCDC88CQ9P219 2028 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 FER1L5A0AVI2 2057 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 SPTA1P02549 2419 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 ZNF189O75820 626 aaPredicted RBP16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 METTL18O95568 372 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 CRTAMO95727 393 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 HALP42357 657 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 CAPZBP47756 277 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 LEPRP48357 1165 aaKnown RBP16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 RAB15P59190 212 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 XIAPP98170 497 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 LY6DQ14210 128 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 DCAF12Q5T6F0 453 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 PLXDC1Q8IUK5 500 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 KLHDC8BQ8IXV7 354 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 SLC35B2Q8TB61 432 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 TGM7Q96PF1 710 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 TMEM121Q9BTD3 319 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 APMAPQ9HDC9 416 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 SLC40A1Q9NP59 571 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 CRLS1Q9UJA2 301 aa16.87■□□□□ 0.29
CDC42BPB-208ENST00000561271 C9P02748 559 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 AMD1P17707 334 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 ATP1A2P50993 1020 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 LONRF2Q1L5Z9 754 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 DUS1LQ6P1R4 473 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 NKD1Q969G9 470 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 RTP4Q96DX8 246 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 RNF31Q96EP0 1072 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 SGF29Q96ES7 293 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 DNAJC1Q96KC8 554 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 C9orf72Q96LT7 481 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 ASPSCR1Q9BZE9 553 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 SEMA4CQ9C0C4 833 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 FAM96AQ9H5X1 160 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 PIH1D1Q9NWS0 290 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 SIDT1Q9NXL6 827 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 GUCA1BQ9UMX6 200 aa16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 CFAP20Q9Y6A4 193 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-208ENST00000561271 CAPN5O15484 640 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 LDB2O43679 373 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 KCNJ13O60928 360 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 ANKRD34CP0C6C1 535 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 ITGALP20701 1170 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 SEPHS1P49903 392 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 PPP1CAP62136 330 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 PDE1BQ01064 536 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 MC2RQ01718 297 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 SEPT6Q14141 434 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 RPE65Q16518 533 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 PARP6Q2NL67 630 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 P3H1Q32P28 736 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms