RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR2L2Q8NH16 312 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 IFI44Q8TCB0 444 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 CAMK1GQ96NX5 476 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 FERD3LQ96RJ6 166 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 DPYSL5Q9BPU6 564 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 STRADBQ9C0K7 418 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 TCEAL2Q9H3H9 227 aaPredicted RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 GPR27Q9NS67 375 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 IMP3Q9NV31 184 aaKnown RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 NYNRINQ9P2P1 1898 aaKnown RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 CNOT6Q9ULM6 557 aaKnown RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 PCDHGA1Q9Y5H4 931 aa10.54□□□□□ -0.72
TPM1-229ENST00000561242 OAS3Q9Y6K5 1087 aaKnown RBP10.54□□□□□ -0.72
TPM1-229ENST00000561242 SPAARA0A1B0GVQ0 90 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 C10orf142B7Z368 130 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 GOLGA8KD6RF30 607 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 GOLGA8TH3BQL2 631 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 CHUKO15111 745 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 NUDT21O43809 227 aaKnown RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 SOD1P00441 154 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 GP1BAP07359 652 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 F3P13726 295 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 ITGB6P18564 788 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 RPL10P27635 214 aaKnown RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 FOXN2P32314 431 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 SKIV2L2P42285 1042 aaKnown RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 MAGEA4P43358 317 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 ARSDP51689 593 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 CLCNKAP51800 687 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 ACVR1Q04771 509 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 HSPA14Q0VDF9 509 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 SPIDRQ14159 915 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 CRYMQ14894 314 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 AMZ1Q400G9 498 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 PACS1Q6VY07 963 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 KIAA0408Q6ZU52 694 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 TMEM135Q86UB9 458 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 PELI3Q8N2H9 469 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 GPR150Q8NGU9 434 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 ART4Q93070 314 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 CERS2Q96G23 380 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 SCARF2Q96GP6 870 aaPredicted RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 SIGLEC10Q96LC7 697 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 C12orf66Q96MD2 445 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 TSNARE1Q96NA8 513 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 GFM1Q96RP9 751 aaKnown RBP10.53□□□□□ -0.72
TPM1-229ENST00000561242 TRIM54Q9BYV2 358 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 EPB41L1Q9H4G0 881 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 TREX1Q9NSU2 369 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 TAS2R13Q9NYV9 303 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 POLG2Q9UHN1 485 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 FBXO5Q9UKT4 447 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 CRYL1Q9Y2S2 319 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 THADAQ6YHU6 1953 aa10.53□□□□□ -0.72
TPM1-229ENST00000561242 TRIM38O00635 465 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 DUX1O43812 170 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 ERVK-10P10266 1014 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 PKMP14618 531 aaKnown RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 PNLIPP16233 465 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 SAT1P21673 171 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 GPR3P46089 330 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 CD151P48509 253 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 PRLHRP49683 370 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 CSE1LP55060 971 aaKnown RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 SHBQ15464 509 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 SMAD1Q15797 465 aaKnown RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 UAP1Q16222 522 aaPredicted RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 TPRG1LQ5T0D9 272 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 LRRC8EQ6NSJ5 796 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 IYDQ6PHW0 289 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 DBX2Q6ZNG2 339 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 PIP4P1Q86T03 277 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 PIM3Q86V86 326 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 OOSP2Q86WS3 158 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 ARL14Q8N4G2 192 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 CLDN19Q8N6F1 224 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 GPATCH11Q8N954 259 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 CFAP61Q8NHU2 1237 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 CCL4L1Q8NHW4 92 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 TSPAN17Q96FV3 270 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 LINC00615Q96LM1 132 aaPredicted RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 ZNF778Q96MU6 729 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 TMEM74Q96NL1 305 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 BOCQ9BWV1 1114 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 PHACTR1Q9C0D0 580 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 TRIT1Q9H3H1 467 aaKnown RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 PRDM8Q9NQV8 689 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 LATS2Q9NRM7 1088 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 POT1Q9NUX5 634 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 KLF15Q9UIH9 416 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 LNPEPQ9UIQ6 1025 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 TRMT6Q9UJA5 497 aaKnown RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 SLC39A10Q9ULF5 831 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms