RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 KLHL41O60662 606 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 APODP05090 189 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ENO1P06733 434 aaKnown RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 NCF2P19878 526 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 AOAHP28039 575 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PRDX6P30041 224 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CCR7P32248 378 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 SH3BP2P78314 561 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 E2F5Q15329 346 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PCBP2Q15366 365 aaKnown RBP eCLIP12.72□□□□□ -0.371e-12■□□□□ 8.4
SNX1-211ENST00000560829 TMEM52BQ4KMG9 183 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CYB5D1Q6P9G0 228 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 AGAP11Q8TF27 550 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 DCUN1D1Q96GG9 259 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 NECTIN4Q96NY8 510 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 NSUN5Q96P11 429 aaKnown RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 MIPEPQ99797 713 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 HDAC8Q9BY41 377 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 RDH14Q9HBH5 336 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 TAS2R1Q9NYW7 299 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CD274Q9NZQ7 290 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PCTPQ9UKL6 214 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ANHXE9PGG2 379 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 NEMP1O14524 444 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 KPNA5O15131 536 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 RAD51BO15315 384 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 FFAR2O15552 330 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 SGTAO43765 313 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 NUAK1O60285 661 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 MGRN1O60291 552 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 MLYCDO95822 493 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 EPHX1P07099 455 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 KANK2Q63ZY3 851 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 FRA10AC1Q70Z53 315 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
SNX1-211ENST00000560829 NLRP8Q86W28 1048 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 RAB7BQ96AH8 199 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 ACOX2Q99424 681 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 C1orf21Q9H246 121 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 ZBTB26Q9HCK0 441 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 MRGBPQ9NV56 204 aa12.71□□□□□ -0.37
SNX1-211ENST00000560829 MBD1Q9UIS9 605 aaPredicted RBP12.71□□□□□ -0.37
SNX1-211ENST00000560829 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
SNX1-211ENST00000560829 PRRC2BQ5JSZ5 2229 aaKnown RBP12.71□□□□□ -0.38
SNX1-211ENST00000560829 NCF1BA6NI72 391 aaPredicted RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 NCF1CA8MVU1 366 aaPredicted RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 E2F3O00716 465 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 PPP6CO00743 305 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 DCXO43602 365 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 NCF1P14598 390 aaPredicted RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 TSPAN8P19075 237 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 AKT1P31749 480 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 MNAT1P51948 309 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 KLF10Q13118 480 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 HTR4Q13639 388 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 NAA25Q14CX7 972 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 ACOX1Q15067 660 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CDKL4Q5MAI5 379 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 PLEKHS1Q5SXH7 462 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CHSY3Q70JA7 882 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 TMPRSS6Q8IU80 811 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 PELI3Q8N2H9 469 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 TEX9Q8N6V9 391 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 AP2M1Q96CW1 435 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 MID1IP1Q9NPA3 183 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CACNA2D2Q9NY47 1150 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 ADAMTS6Q9UKP5 1117 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 STON1Q9Y6Q2 735 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CEP290O15078 2479 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 ANTXRLA6NF34 631 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 AZIN1O14977 448 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 GYG2O15488 501 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 GSC2O15499 205 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 SKAP2O75563 359 aaPredicted RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 ESRRBO95718 433 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 MPC1LP0DKB6 136 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms