RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC4A1P02730 911 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 ALPPP05187 535 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 FECHP22830 423 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 IL1R2P27930 398 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 UBXN1Q04323 297 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 STX1AQ16623 288 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 QPCTQ16769 361 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 ARMC6Q6NXE6 501 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 D2HGDHQ8N465 521 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 TRAM1L1Q8N609 369 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 NLNQ9BYT8 704 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 SOHLH2Q9NX45 425 aa17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 COPG1Q9Y678 874 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-208ENST00000560514 MEN1O00255 615 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 KLHL41O60662 606 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 MTX2O75431 263 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 FTLP02792 175 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 RARAP10276 462 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 DCDC1P59894 354 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 IHHQ14623 411 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 GPR19Q15760 415 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 IFI16Q16666 785 aaKnown RBP17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 CERS6Q6ZMG9 384 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 ZNF517Q6ZMY9 492 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 RAB43Q86YS6 212 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 GDAP1Q8TB36 358 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 ARRDC2Q8TBH0 407 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 MAML1Q92585 1016 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 TTC25Q96NG3 672 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 LRFN5Q96NI6 719 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 NUP85Q9BW27 656 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 SLC7A5P2Q9GIP4 190 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 AGPAT4Q9NRZ5 378 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 MYO1AQ9UBC5 1043 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 PIKFYVEQ9Y2I7 2098 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 CSMD1Q96PZ7 3565 aa17.43■□□□□ 0.38
TSPAN3-208ENST00000560514 ZBTB11O95625 1053 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 MBD3O95983 291 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 GLRBP48167 497 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 APTXQ7Z2E3 356 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 OOSP2Q86WS3 158 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 DSELQ8IZU8 1212 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 GPR26Q8NDV2 337 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 TEKT4Q8WW24 435 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 TM9SF4Q92544 642 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 TRIM11Q96F44 468 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 NAT10Q9H0A0 1025 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 LATS2Q9NRM7 1088 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 HRASLS2Q9NWW9 162 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 DTLQ9NZJ0 730 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 SHOC2Q9UQ13 582 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 ENTPD4Q9Y227 616 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 WDR37Q9Y2I8 494 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 PADI2Q9Y2J8 665 aa17.42■□□□□ 0.38
TSPAN3-208ENST00000560514 MFSD11O43934 449 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 KCNJ13O60928 360 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 HLA-DQB2P05538 268 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 CCNCP24863 283 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 CD86P42081 329 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 NIPAL4Q0D2K0 466 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 GALNT2Q10471 571 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 ATP1A4Q13733 1029 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 GALNT3Q14435 633 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 PLEKHS1Q5SXH7 462 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 ZNF547Q8IVP9 402 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 ZBTB2Q8N680 514 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 ZNF501Q96CX3 271 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 RANBP9Q96S59 729 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 GPR63Q9BZJ6 419 aa17.41■□□□□ 0.38
TSPAN3-208ENST00000560514 OR5K3A6NET4 321 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 C9J4A7 227 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 KRT38O76015 456 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 IPO13O94829 963 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 MYBL1P10243 752 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 TCF4P15884 667 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 PIGHQ14442 188 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 RPE65Q16518 533 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 AMZ2Q86W34 360 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 ZADH2Q8N4Q0 377 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 SLC38A9Q8NBW4 561 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 CLEC1AQ8NC01 280 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 GPR150Q8NGU9 434 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 FER1L6-AS2Q96M78 137 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 HSD3B7Q9H2F3 369 aa17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 MDC1Q14676 2089 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-208ENST00000560514 SPTBP11277 2137 aa17.39■□□□□ 0.38
TSPAN3-208ENST00000560514 MAP3K7O43318 606 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 GZMAP12544 262 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 CYP2A7P20853 494 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 OTX2P32243 289 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 SSR1P43307 286 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 TMEM115Q12893 351 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 XRCC4Q13426 336 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms