RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 RRADP55042 308 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 GSDMDP57764 484 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 GALNT2Q10471 571 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 GALNT3Q14435 633 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 IRF2BP2Q7Z5L9 587 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 C11orf96Q7Z7L8 435 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 LRRC49Q8IUZ0 686 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 TRAM1L1Q8N609 369 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 ENOX1Q8TC92 643 aaKnown RBP16.23■□□□□ 0.19
HERC1-207ENST00000560316 INPP5DQ92835 1189 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 NUP85Q9BW27 656 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 ILKAPQ9H0C8 392 aaPredicted RBP16.23■□□□□ 0.19
HERC1-207ENST00000560316 ZFYVE1Q9HBF4 777 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 C5AR2Q9P296 337 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 SHOC2Q9UQ13 582 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 ENTPD4Q9Y227 616 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 NTNG1Q9Y2I2 539 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 COPG1Q9Y678 874 aaKnown RBP16.23■□□□□ 0.19
HERC1-207ENST00000560316 POLEQ07864 2286 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 FTLP02792 175 aaPredicted RBP16.22■□□□□ 0.19
HERC1-207ENST00000560316 CAPN1P07384 714 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 MMP2P08253 660 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 CD86P42081 329 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 HALP42357 657 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 UBXN1Q04323 297 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 ABRQ12979 859 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 CRB2Q5IJ48 1285 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 PPP1R2P3Q6NXS1 205 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 KLHL35Q6PF15 583 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 FBXO38Q6PIJ6 1188 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 FAM198BQ6UWH4 519 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 TRAPPC5Q8IUR0 188 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 SGSM3Q96HU1 749 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 PPM1MQ96MI6 270 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 LRFN5Q96NI6 719 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 PSMD13Q9UNM6 376 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 SPTBP11277 2137 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 PIKFYVEQ9Y2I7 2098 aa16.22■□□□□ 0.19
HERC1-207ENST00000560316 ADGRG4Q8IZF6 3080 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 OR5K3A6NET4 321 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 LGALS16A8MUM7 142 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 VEGFDO43915 354 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 LCA5LO95447 670 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CD48P09326 243 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CCDC172P0C7W6 258 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CA5AP35218 305 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 RORAP35398 523 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 GLRBP48167 497 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 DCDC1P59894 354 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 KRT81Q14533 505 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 RPE65Q16518 533 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CCDC122Q5T0U0 273 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 FAM182AQ5T1J6 154 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 HGSNATQ68CP4 663 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 SP5Q6BEB4 398 aaPredicted RBP16.21■□□□□ 0.19
HERC1-207ENST00000560316 TIGD7Q6NT04 549 aaPredicted RBP16.21■□□□□ 0.19
HERC1-207ENST00000560316 OR8K5Q8NH50 307 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CPT1BQ92523 772 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 CD180Q99467 661 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 BARD1Q99728 777 aaKnown RBP16.21■□□□□ 0.19
HERC1-207ENST00000560316 FANCLQ9NW38 375 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 HRASLS2Q9NWW9 162 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 SOHLH2Q9NX45 425 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 TMPRSS11EQ9UL52 423 aa16.21■□□□□ 0.19
HERC1-207ENST00000560316 PDZD2O15018 2839 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 LRRTM2O43300 516 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 ZBTB11O95625 1053 aaPredicted RBP16.2■□□□□ 0.18
HERC1-207ENST00000560316 VCLP18206 1134 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 CCNCP24863 283 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 OTX2P32243 289 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 ARCN1P48444 511 aaKnown RBP16.2■□□□□ 0.18
HERC1-207ENST00000560316 BECN1Q14457 450 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 PTCHD3Q3KNS1 767 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 CT47A1Q5JQC4 288 aaPredicted RBP16.2■□□□□ 0.18
HERC1-207ENST00000560316 TMTC4Q5T4D3 741 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 LYPLAL1Q5VWZ2 237 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 NCBP2-AS2Q69YL0 99 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 PDPK2PQ6A1A2 396 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 TMC3Q7Z5M5 1100 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 MCEMP1Q8IX19 187 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 SYTL1Q8IYJ3 562 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 UBE2Q2Q8WVN8 375 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 TEKT4Q8WW24 435 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 TLR10Q9BXR5 811 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 ADGRE3Q9BY15 652 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 LATS2Q9NRM7 1088 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 PCMTD2Q9NV79 361 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 CFAP20Q9Y6A4 193 aaKnown RBP16.2■□□□□ 0.18
HERC1-207ENST00000560316 SCINQ9Y6U3 715 aa16.2■□□□□ 0.18
HERC1-207ENST00000560316 CELSR1Q9NYQ6 3014 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 MDC1Q14676 2089 aaKnown RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 BPIP17213 487 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 KPNA2P52292 529 aaKnown RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 SLC25A11Q02978 314 aaKnown RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 TMEM115Q12893 351 aaPredicted RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 LLGL1Q15334 1064 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms