RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
USP3-213ENST00000559711 SH3BP2P78314 561 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 CSGALNACT1Q8TDX6 532 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 ZNF483Q8TF39 744 aaPredicted RBP12.5□□□□□ -0.41
USP3-213ENST00000559711 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 AP2M1Q96CW1 435 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 WRAP53Q9BUR4 548 aaKnown RBP12.5□□□□□ -0.41
USP3-213ENST00000559711 RSPH9Q9H1X1 276 aaPredicted RBP12.5□□□□□ -0.41
USP3-213ENST00000559711 WDR55Q9H6Y2 383 aaPredicted RBP12.5□□□□□ -0.41
USP3-213ENST00000559711 ZDHHC4Q9NPG8 344 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 OARD1Q9Y530 152 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
USP3-213ENST00000559711 KIAA1549LQ6ZVL6 1849 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 QSOX1O00391 747 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 PLK4O00444 970 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 KPNA5O15131 536 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 NUAK1O60285 661 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 SNX2O60749 519 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 JUNP05412 331 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 MSH3P20585 1137 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 EPHA3P29320 983 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 AKT1P31749 480 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 PSMD8P48556 350 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 INHBCP55103 352 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CDH13P55290 713 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 SATB1Q01826 763 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CLCQ05315 142 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 DPTQ07507 201 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CNTN1Q12860 1018 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 LCP2Q13094 533 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 LSM12Q3MHD2 195 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 UGT3A2Q3SY77 523 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 KHDC1Q4VXA5 237 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 PLEKHS1Q5SXH7 462 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 ACAD11Q709F0 780 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CHPFQ8IZ52 775 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CLYBLQ8N0X4 340 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 ZNF513Q8N8E2 541 aaPredicted RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 PDPRQ8NCN5 879 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 FAM126AQ9BYI3 521 aaPredicted RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 MEAF6Q9HAF1 191 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 RDH14Q9HBH5 336 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CD207Q9UJ71 328 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 CNOT6Q9ULM6 557 aaKnown RBP12.49□□□□□ -0.41
USP3-213ENST00000559711 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
USP3-213ENST00000559711 NCF1BA6NI72 391 aaPredicted RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 NCF1CA8MVU1 366 aaPredicted RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 H0YHG0 523 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 PPP6CO00743 305 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 SDHDO14521 159 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 RAD51BO15315 384 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 MTX2O75431 263 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 SOD1P00441 154 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 ESRRAP11474 423 aaPredicted RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 C6P13671 934 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 NCF1P14598 390 aaPredicted RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 TSPAN8P19075 237 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 AGTR2P50052 363 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 KCNJ2P63252 427 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 BTKQ06187 659 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 PCBP2Q15366 365 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP3-213ENST00000559711 PDCD2Q16342 344 aaPredicted RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 AAK1Q2M2I8 961 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 TRPC4APQ8TEL6 797 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 DLG3Q92796 817 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 TAGLN3Q9UI15 199 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 ADAMTS6Q9UKP5 1117 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 TNPO3Q9Y5L0 923 aaKnown RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 GOLGA8QA0A0J9YX86 632 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 GOLGA8OA6NCC3 632 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 E9PBE3 544 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 GOLGA8NF8WBI6 632 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 NEMP1O14524 444 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 FFAR2O15552 330 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 AP1G1O43747 822 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 KLHL41O60662 606 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 MMP20O60882 483 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 RASSF9O75901 435 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 MLYCDO95822 493 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms