RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 TMEM151AQ8N4L1 468 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SLC6A18Q96N87 628 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 VPS35Q96QK1 796 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 AARSD1Q9BTE6 412 aaKnown RBP16.34■□□□□ 0.21
TPM1-219ENST00000559397 NMRAL1Q9HBL8 299 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 SMOXQ9NWM0 555 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 COPG2Q9UBF2 871 aa16.34■□□□□ 0.21
TPM1-219ENST00000559397 H0Y8X5 98 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 RHOBTB1O94844 696 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 KLHL2O95198 593 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 APOA4P06727 396 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ITGALP20701 1170 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 FDXRP22570 491 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ITPKAP23677 461 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ALDH3A1P30838 453 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 SLC26A3P40879 764 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 CDKN2DP55273 166 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 PFN3P60673 137 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 TIAL1Q01085 375 aaKnown RBP eCLIP16.33■□□□□ 0.29e-7■■■□□ 18.9
TPM1-219ENST00000559397 DLG1Q12959 904 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ZNF460Q14592 562 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ITIH4Q14624 930 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 GPR33Q49SQ1 333 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ZRANB3Q5FWF4 1079 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 WDR45BQ5MNZ6 344 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.2
TPM1-219ENST00000559397 CES4AQ5XG92 561 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 C6orf89Q6UWU4 347 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 SPATA21Q7Z572 469 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 ABI3BPQ7Z7G0 1075 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 CCDC197Q8NCU1 140 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 KCTD4Q8WVF5 259 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 BTN2A2Q8WVV5 523 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 COX14Q96I36 57 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 TEX101Q9BY14 249 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 VPS9D1Q9Y2B5 631 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 CRYL1Q9Y2S2 319 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 R4GN57 208 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 GON4LQ3T8J9 2241 aa16.33■□□□□ 0.2
TPM1-219ENST00000559397 TARM1B6A8C7 271 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 CPA3P15088 417 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 DHPSP49366 369 aaPredicted RBP16.32■□□□□ 0.2
TPM1-219ENST00000559397 TTPAP49638 278 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 IRX4P78413 519 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 CDK3Q00526 305 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 TSNAXIP1Q2TAA8 658 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 AARS2Q5JTZ9 985 aaKnown RBP16.32■□□□□ 0.2
TPM1-219ENST00000559397 LYSMD4Q5XG99 296 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 ATG16L1Q676U5 607 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 HEATR4Q86WZ0 1026 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 SPATS2Q86XZ4 545 aaKnown RBP16.32■□□□□ 0.2
TPM1-219ENST00000559397 RGL4Q8IZJ4 473 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 OR6Y1Q8NGX8 325 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 RDH11Q8TC12 318 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 GLYATL1Q969I3 302 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 FUBP1Q96AE4 644 aaKnown RBP16.32■□□□□ 0.2
TPM1-219ENST00000559397 UBXN10Q96LJ8 280 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 TSNARE1Q96NA8 513 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 APOOQ9BUR5 198 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 POPDC3Q9HBV1 291 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 TM9SF3Q9HD45 589 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 IGSF5Q9NSI5 407 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 RUVBL2Q9Y230 463 aaKnown RBP16.32■□□□□ 0.2
TPM1-219ENST00000559397 OR1A2Q9Y585 309 aa16.32■□□□□ 0.2
TPM1-219ENST00000559397 DNAH14Q0VDD8 3507 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 A0A1W2PR77 199 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 G3V2L1 256 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 INPP4BO15327 924 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
TPM1-219ENST00000559397 NDUFS3O75489 264 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 HOXC4P09017 264 aaPredicted RBP16.31■□□□□ 0.2
TPM1-219ENST00000559397 SBK3P0C264 359 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 FGF3P11487 239 aaPredicted RBP16.31■□□□□ 0.2
TPM1-219ENST00000559397 NEFHP12036 1026 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
TPM1-219ENST00000559397 RACK1P63244 317 aaKnown RBP16.31■□□□□ 0.2
TPM1-219ENST00000559397 BST1Q10588 318 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 CHI3L2Q15782 390 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 SERPINA9Q86WD7 417 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 NXPE1Q8N323 547 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 NXNL1Q96CM4 212 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 HIC2Q96JB3 615 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 TSSK1BQ9BXA7 367 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 LGR4Q9BXB1 951 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 MIR1-1HGQ9H1L0 117 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 WDR26Q9H7D7 661 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 GPR27Q9NS67 375 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 CRLS1Q9UJA2 301 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
TPM1-219ENST00000559397 PFDN6O15212 129 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 CD9P21926 228 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 ACRV1P26436 265 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 YPEL5P62699 121 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 GPRC6AQ5T6X5 926 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 PEAR1Q5VY43 1037 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 LRRC8EQ6NSJ5 796 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 ZC3H14Q6PJT7 736 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms