RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CSO75390 466 aaKnown RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 MLNP12872 115 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 JUPP14923 745 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 SLC19A1P41440 591 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 UBE2IP63279 158 aaKnown RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 DMPKQ09013 629 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 LAMB3Q13751 1172 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 NR1D2Q14995 579 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 NKAIN2Q5VXU1 208 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 CASC4Q6P4E1 433 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 NAPRTQ6XQN6 538 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 UNC13CQ8NB66 2214 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 GPR150Q8NGU9 434 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 ZNF592Q92610 1267 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 PEX13Q92968 403 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 ZNF669Q96BR6 464 aaPredicted RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 ABCG4Q9H172 646 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 LRRN3Q9H3W5 708 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 XAB2Q9HCS7 855 aaKnown RBP18.36■□□□□ 0.53
CASC4-209ENST00000559222 CATSPERZQ9NTU4 200 aa18.36■□□□□ 0.53
CASC4-209ENST00000559222 MGAT4DA6NG13 374 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 D6RAR5 112 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 AGRPO00253 132 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 VAPBO95292 243 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CDK4P11802 303 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 ALDH4A1P30038 563 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CSF2RBP32927 897 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 RPL21P46778 160 aaKnown RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 FASLGP48023 281 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 ARCN1P48444 511 aaKnown RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 ITGA8P53708 1063 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 SARNPP82979 210 aaKnown RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 HHEXQ03014 270 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CFHR1Q03591 330 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 DHX9Q08211 1270 aaKnown RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 AMZ1Q400G9 498 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 IGDCC3Q8IVU1 814 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 SPNS2Q8IVW8 549 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 UNC5BQ8IZJ1 945 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 SPDYE1Q8NFV5 336 aaPredicted RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 JPH3Q8WXH2 748 aaPredicted RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 LINC00615Q96LM1 132 aaPredicted RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 RMDN2Q96LZ7 410 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CNTNAP3BQ96NU0 1288 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 NUDT22Q9BRQ3 303 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 TBC1D10AQ9BXI6 508 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CNTNAP3Q9BZ76 1288 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 FOXP3Q9BZS1 431 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 WWP1Q9H0M0 922 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 RDH14Q9HBH5 336 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
CASC4-209ENST00000559222 CFAP20Q9Y6A4 193 aaKnown RBP18.35■□□□□ 0.53
CASC4-209ENST00000559222 TPRP12270 2363 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 ZCWPW2A0A1B0GU75 182 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 CFAP99D6REC4 459 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 AP3B1O00203 1094 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 CD3EAPO15446 510 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 KRT37O76014 449 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 POLBP06746 335 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 RALBP11234 206 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 PNLIPP16233 465 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 IDSP22304 550 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 DHX34Q14147 1143 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 SPIDRQ14159 915 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 ITIH4Q14624 930 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 ANKRD20A4Q4UJ75 823 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 HP1BP3Q5SSJ5 553 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 AGAP9Q5VTM2 703 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 KIAA0930Q6ICG6 404 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 HIBCHQ6NVY1 386 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 ABRAXAS1Q6UWZ7 409 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 PACS1Q6VY07 963 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 SYDE1Q6ZW31 735 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 ZNF572Q7Z3I7 529 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 OR6C4Q8NGE1 309 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 ZNF514Q96K75 400 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 RUNDC3BQ96NL0 473 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 GFM1Q96RP9 751 aaKnown RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 DPH5Q9H2P9 285 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 PLAC1Q9HBJ0 212 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 TMEM9Q9P0T7 183 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 CDC23Q9UJX2 597 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 SNX24Q9Y343 169 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 ENTPD2Q9Y5L3 495 aa18.34■□□□□ 0.53
CASC4-209ENST00000559222 DNMT3AQ9Y6K1 912 aaPredicted RBP18.34■□□□□ 0.53
CASC4-209ENST00000559222 IGHV1OR21-1A0A087WYE8 117 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 KIR2DS5A0A0G2JLQ3 304 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 A0A0G2JNG1 304 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 SDR42E2A6NKP2 422 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 IQCF5A8MTL0 148 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 EFCAB8A8MWE9 144 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 KIR2DS3K7RE56 304 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 ITGB6P18564 788 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 CD1CP29017 333 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms