RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MED16Q9Y2X0 877 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 RPS6KL1Q9Y6S9 549 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 FAM169AQ9Y6X4 670 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 A0A1W2PQM1 296 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 IQCF5A8MTL0 148 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 PPM1DO15297 605 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 S1PR4O95977 384 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ALPPL2P10696 532 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 GABRB3P28472 473 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 PMLP29590 882 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 SLC1A2P43004 574 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 DRG2P55039 364 aaKnown RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 INSM1Q01101 510 aaPredicted RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 TUBB2AQ13885 445 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 NR1D2Q14995 579 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 HIF1AQ16665 826 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 INSCQ1MX18 579 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 C8orf74Q6P047 294 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 DHRS13Q6UX07 377 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 NAPRTQ6XQN6 538 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 EFL1Q7Z2Z2 1120 aaKnown RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 TMPRSS9Q7Z410 1059 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 MAATS1Q7Z4T9 603 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 CILP2Q8IUL8 1156 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ARL14Q8N4G2 192 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 OR2L2Q8NH16 312 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 IFI44Q8TCB0 444 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ADAMTS14Q8WXS8 1223 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 CCDC74AQ96AQ1 378 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 TUBB2BQ9BVA1 445 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ZCCHC2Q9C0B9 1178 aaKnown RBP11.23□□□□□ -0.61
SNX1-204ENST00000559061 DPEP2Q9H4A9 486 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 SMYD2Q9NRG4 433 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 GALPQ9UBC7 116 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 CDYLQ9Y232 598 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 PCDHGA1Q9Y5H4 931 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 MAD1L1Q9Y6D9 718 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
SNX1-204ENST00000559061 ASPMQ8IZT6 3477 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 TRBV23OR9-2A0A075B6M9 112 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CTAGE15A4D2H0 777 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 MGAT4DA6NG13 374 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 OR52A4PA6NMU1 304 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 SMAPO00193 183 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 SNX2O60749 519 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 RFPL3O75679 317 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 ADRB1P08588 477 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CTAGE8P0CG41 777 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 ERVK-10P10266 1014 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 F3P13726 295 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 SPINK2P20155 84 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 OGNP20774 298 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 RPL10P27635 214 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 SLC19A1P41440 591 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 GPX6P59796 221 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 MPP1Q00013 466 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNX1-204ENST00000559061 CFHR1Q03591 330 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 PDIA2Q13087 525 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 GTF2H3Q13889 308 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 SEPT7Q16181 437 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 FASTKD1Q53R41 847 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 DNAJC21Q5F1R6 531 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 AGAP9Q5VTM2 703 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CDCP2Q5VXM1 449 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 METRNLQ641Q3 311 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 NEPROQ6NW34 567 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 DUS1LQ6P1R4 473 aaKnown RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 ABRAXAS1Q6UWZ7 409 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 WASH2PQ6VEQ5 465 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CTAGE6Q86UF2 777 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 AMZ2Q86W34 360 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 ZNF761Q86XN6 746 aaPredicted RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 VRK3Q8IV63 474 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CNTN4Q8IWV2 1026 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 CTAGE4Q8IX94 777 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 KRT222Q8N1A0 295 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 NRTNQ99748 197 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 OR52A5Q9H2C5 316 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 OSGEPL1Q9H4B0 414 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 COG4Q9H9E3 785 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 WASH6PQ9NQA3 447 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 SAMD15Q9P1V8 674 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 NCOR2Q9Y618 2525 aa11.22□□□□□ -0.61
SNX1-204ENST00000559061 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
SNX1-204ENST00000559061 KIF26BQ2KJY2 2108 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 A0A1W2PNU3 283 aaPredicted RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 SLC5A10A0PJK1 596 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 MAGEB16A2A368 324 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms