RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 UGT3A2Q3SY77 523 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SERPINA13PQ6UXR4 307 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TUBB6Q9BUF5 446 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TMEM245Q9H330 911 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SMOXQ9NWM0 555 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ZDHHC3Q9NYG2 299 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TAGLN3Q9UI15 199 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CKAP5Q14008 2032 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 NEMP1O14524 444 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 SUPT3HO75486 399 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 SUPT7LO94864 414 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 GLULP15104 373 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-207ENST00000558763 IL12RB1P42701 662 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 WASP42768 502 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 AGTR2P50052 363 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 SH3BP2P78314 561 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 BTKQ06187 659 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 POM121L1PQ3SYA9 428 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 C2orf27AQ580R0 203 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 FBXO48Q5FWF7 155 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 PTRHD1Q6GMV3 140 aaKnown RBP12.77□□□□□ -0.37
SMAD3-207ENST00000558763 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 CHPFQ8IZ52 775 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 SCAMP4Q969E2 229 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 MSANTD3Q96H12 275 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 BTBD10Q9BSF8 475 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 ABCG8Q9H221 673 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 MEAF6Q9HAF1 191 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 ZBTB26Q9HCK0 441 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.37
SMAD3-207ENST00000558763 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 STX16-NPEPL1H3BU86 382 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 STX16O14662 325 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 SLC25A14O95258 325 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ESRRAP11474 423 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 CYP2A6P11509 494 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ITGB6P18564 788 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 DRD1P21728 446 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 CPOXP36551 454 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ETV3P41162 512 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 NSG1P42857 185 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 RASSF2P50749 326 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TGFBIQ15582 683 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 KHDC1Q4VXA5 237 aaKnown RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ACSBG2Q5FVE4 666 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 HENMT1Q5T8I9 393 aaKnown RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ZDHHC20Q5W0Z9 365 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TMEM198Q66K66 360 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 Q6ZVL8 140 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TECPR1Q7Z6L1 1165 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 SIX5Q8N196 739 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 FBXO39Q8N4B4 442 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 RBM15BQ8NDT2 890 aaKnown RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 DTX3LQ8TDB6 740 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 KLC4Q9NSK0 619 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 PPM1HQ9ULR3 514 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ITM2BQ9Y287 266 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 FADS2P1A8MWK0 482 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 GSC2O15499 205 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 DCXO43602 365 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 SGTAO43765 313 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 GFAPP14136 432 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 KIR2DL1P43626 348 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 FOXA1P55317 472 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 GBX1Q14549 363 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 NAA25Q14CX7 972 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 CLEC6AQ6EIG7 209 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ZNF852Q6ZMS4 543 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 PELI3Q8N2H9 469 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TEX9Q8N6V9 391 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ZNF483Q8TF39 744 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 DLG3Q92796 817 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ARRDC3Q96B67 414 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TTC1Q99614 292 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 COPS8Q99627 209 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms