RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 IL2P60568 153 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 PFN3P60673 137 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 IRF9Q00978 393 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 NFATC4Q14934 902 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 LRRC8EQ6NSJ5 796 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 PAQR3Q6TCH7 311 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 KDM7AQ6ZMT4 941 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 LRRTM4Q86VH4 590 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 ANKRD42Q8N9B4 389 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 LKAAEAR1Q8TD35 194 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 TCP10LQ8TDR4 215 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 NAT14Q8WUY8 206 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 KCTD4Q8WVF5 259 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 BMFQ96LC9 184 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 UBXN10Q96LJ8 280 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 EBF2Q9HAK2 575 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 NMRAL1Q9HBL8 299 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 DNMT3AQ9Y6K1 912 aaPredicted RBP16.61■□□□□ 0.25
SNX1-203ENST00000558040 CHUKO15111 745 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 CBSLP0DN79 551 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 AOAHP28039 575 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
SNX1-203ENST00000558040 CBSP35520 551 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 PGGT1BP53609 377 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 ATP6V0D1P61421 351 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 PTK2BQ14289 1009 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 CSHL1Q14406 222 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 CCDC153Q494R4 210 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 SYTL3Q4VX76 610 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 PLEKHS1Q5SXH7 462 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 LPCAT2Q7L5N7 544 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 ABI3BPQ7Z7G0 1075 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 CENPLQ8N0S6 344 aaPredicted RBP16.6■□□□□ 0.25
SNX1-203ENST00000558040 GIMAP7Q8NHV1 300 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 ELMO1Q92556 727 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 LINC00615Q96LM1 132 aaPredicted RBP16.6■□□□□ 0.25
SNX1-203ENST00000558040 HSPA12BQ96MM6 686 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 WDR92Q96MX6 357 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 C1QTNF1Q9BXJ1 281 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 DUSP15Q9H1R2 295 aaPredicted RBP16.6■□□□□ 0.25
SNX1-203ENST00000558040 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 RUVBL2Q9Y230 463 aaKnown RBP16.6■□□□□ 0.25
SNX1-203ENST00000558040 SLC17A4Q9Y2C5 497 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 CA5BQ9Y2D0 317 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 PLLPQ9Y342 182 aa16.6■□□□□ 0.25
SNX1-203ENST00000558040 C17orf113A0A1B0GUU1 675 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 H0Y8X5 98 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 KMOO15229 486 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 GRID2O43424 1007 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 DNAJC6O75061 913 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 ENO3P13929 434 aaPredicted RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 BCKDHBP21953 392 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 CCR7P32248 378 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 PLOD1Q02809 727 aaPredicted RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 BOP1Q14137 746 aaKnown RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 ACAP2Q15057 778 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 WDR45BQ5MNZ6 344 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 N4BP2L1Q5TBK1 243 aaPredicted RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 CRTC3Q6UUV7 619 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 TMEM207Q6UWW9 146 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 Q6ZSR6 202 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 CDHR3Q6ZTQ4 885 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 CPNE9Q8IYJ1 553 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 PLD6Q8N2A8 252 aaKnown RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 DEFB119Q8N690 84 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 BEND7Q8N7W2 519 aaPredicted RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 OR56A4Q8NGH8 313 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 ANKRD49Q8WVL7 239 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 ASZ1Q8WWH4 475 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 LINGO1Q96FE5 620 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 PDLIM5Q96HC4 596 aaKnown RBP16.59■□□□□ 0.25
SNX1-203ENST00000558040 SCYL1Q96KG9 808 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 AASDHPPTQ9NRN7 309 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 IGSF5Q9NSI5 407 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 MID2Q9UJV3 735 aa16.59■□□□□ 0.25
SNX1-203ENST00000558040 TMEM202A6NGA9 273 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 TNFRSF10CO14798 259 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 LIN7AO14910 233 aaPredicted RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 LILRB5O75023 590 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 POP7O75817 140 aaKnown RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 TOP3BO95985 862 aaKnown RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 CEACAM5P06731 702 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 RBP1P09455 135 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 VCLP18206 1134 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 PBLDP30039 288 aaPredicted RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 ATP1A2P50993 1020 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 HSPA14Q0VDF9 509 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 HHATQ5VTY9 493 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 ENPP7Q6UWV6 458 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 DCP2Q8IU60 420 aaKnown RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 GALNT13Q8IUC8 556 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 CCDC63Q8NA47 563 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms