RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 ZDHHC1Q8WTX9 485 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF669Q96BR6 464 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 SGF29Q96ES7 293 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 PANX3Q96QZ0 392 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 CARD6Q9BX69 1037 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 GRHL1Q9NZI5 618 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 MTRF1LQ9UGC7 380 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 ZC3H7BQ9UGR2 993 aaKnown RBP13.47□□□□□ -0.25
SHMT2-234ENST00000557703 PADI4Q9UM07 663 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 PLXNB3Q9ULL4 1909 aa13.47□□□□□ -0.25
SHMT2-234ENST00000557703 ESR1P03372 595 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 ACP5P13686 325 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 XRCC1P18887 633 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-234ENST00000557703 HALP42357 657 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 CD151P48509 253 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 TERF1P54274 439 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 PLTPP55058 493 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-234ENST00000557703 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
SHMT2-234ENST00000557703 HLTFQ14527 1009 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHMT2-234ENST00000557703 NR1D2Q14995 579 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 STEAP4Q687X5 459 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SLC9B2Q86UD5 537 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 CILP2Q8IUL8 1156 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 RELL1Q8IUW5 271 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 CNTN4Q8IWV2 1026 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SLC35F3Q8IY50 421 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SFRP1Q8N474 314 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 HM13Q8TCT9 377 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 PYROXD1Q8WU10 500 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 DPYSL5Q9BPU6 564 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 UCK1Q9HA47 277 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 SARS2Q9NP81 518 aaKnown RBP13.46□□□□□ -0.25
SHMT2-234ENST00000557703 KLHL42Q9P2K6 505 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 HEBP2Q9Y5Z4 205 aa13.46□□□□□ -0.25
SHMT2-234ENST00000557703 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 MYLKQ15746 1914 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 A6NCN8 305 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CCL22O00626 93 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 GPR39O43194 453 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 SGTAO43765 313 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 NOBOXO60393 691 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 RFPL3O75679 317 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 AK4P27144 223 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 NDUFS1P28331 727 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 ELK3P41970 407 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 ACADVLP49748 655 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CTSCP53634 463 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 FOXK2Q01167 660 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 GUCY2DQ02846 1103 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 MSS51Q4VC12 460 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 PPM1JQ5JR12 505 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CRTC3Q6UUV7 619 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 NAGSQ8N159 534 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CCL4L1Q8NHW4 92 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 GSDMBQ8TAX9 411 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 FBXO25Q8TCJ0 367 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 MAPK15Q8TD08 544 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 ADAMTS14Q8WXS8 1223 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CAMK1GQ96NX5 476 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 FCRL3Q96P31 734 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 SPATS2LQ9NUQ6 558 aaKnown RBP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 CORO1CQ9ULV4 474 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-234ENST00000557703 BPTFQ12830 3046 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 DCHS1Q96JQ0 3298 aa13.45□□□□□ -0.26
SHMT2-234ENST00000557703 LY6G6EA0A0G2JKS1 128 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 TCEA3O75764 348 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 CELA2BP08218 269 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 CD9P21926 228 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 LEPRP48357 1165 aaKnown RBP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 CDKN1CP49918 316 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 BIRC2Q13490 618 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 SQSTM1Q13501 440 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 ZNF438Q7Z4V0 828 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms