RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SVOPLQ8N434 492 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 NKAPQ8N5F7 415 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 ALPK1Q96QP1 1244 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 NMUR1Q9HB89 426 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 A0A1W2PQH9 124 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 C17orf102A2RUQ5 167 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 ENPP3O14638 875 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GSTA4O15217 222 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CYP11A1P05108 521 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 ITIH1P19827 911 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 HTR1BP28222 390 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 TSPY1Q01534 308 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 IL10RBQ08334 325 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 PWP1Q13610 501 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 PAN2Q504Q3 1202 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 UGT3A1Q6NUS8 523 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC16A12Q6ZSM3 486 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 MINDY2Q8NBR6 621 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 MBOAT4Q96T53 435 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 RBM4BQ9BQ04 359 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 RBM4Q9BWF3 364 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 OSBPL10Q9BXB5 764 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 POLR1EQ9GZS1 481 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SMURF2Q9HAU4 748 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 HEBP1Q9NRV9 189 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SMPD4Q9NXE4 827 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GALPQ9UBC7 116 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 TLR6Q9Y2C9 796 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GNGT2O14610 69 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 TNFRSF10BO14763 440 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CNOT3O75175 753 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 OR4F21O95013 312 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CST1P01037 141 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 EPOP01588 193 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 UGT2B4P06133 528 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 HTR1AP08908 422 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 PIRTP0C851 137 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 PBX3P40426 434 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 BRCC3P46736 316 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GALNT3Q14435 633 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SETMARQ53H47 684 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 ALFQ53S48 1182 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 LINC00299Q6ZSB3 139 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF683Q8IZ20 524 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CDYL2Q8N8U2 506 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 PJA1Q8NG27 643 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 OR10T2Q8NGX3 314 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 S100ZQ8WXG8 99 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 SLC35B4Q969S0 331 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 CCDC115Q96NT0 180 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GPR21Q99679 349 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 AMBRA1Q9C0C7 1298 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 GORASP2Q9H8Y8 452 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 TTC3P53804 2025 aa11.68□□□□□ -0.54
VIPAS39-211ENST00000557658 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 HAS3O00219 553 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 UGT2B11O75310 529 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NDUFS3O75489 264 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 B3GAT3O94766 335 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 PRSS56P0CW18 603 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 FUT4P22083 530 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NR4A1P22736 598 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 GJA5P36382 358 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 TBX4P57082 545 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 CD47Q08722 323 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 GRB14Q14449 540 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 CTU2Q2VPK5 515 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 MS4A13Q5J8X5 152 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 OVOS1Q6IE37 1185 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 Q6ZSR9 355 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NECAB2Q7Z6G3 386 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 FBXO30Q8TB52 745 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 FIG4Q92562 907 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 BTN2A3PQ96KV6 586 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NODALQ96S42 347 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 MED16Q9Y2X0 877 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NOBOXO60393 691 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 NDUFS2O75306 463 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 ALOX5P09917 674 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 HPCAL1P37235 193 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 PPP2R2BQ00005 443 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 PIGFQ07326 219 aa11.67□□□□□ -0.54
VIPAS39-211ENST00000557658 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms